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Solution structure of the first ig-like domain of signal-regulatory protein beta-1 (SIRP-beta-1)
NMR Experiment Experiment Type Sample Contents Solvent Ionic Strength pH Pressure Temperature (K) Spectrometer 1 3D_13C-separated_NOESY 1.38mM 13C,15N-labeled protein; 20mM d-Tris-HCl(pH 7.0); 100mM NaCl; 1mM d-DTT; 0.02% NaN3; 10% D2O; 90% H2O 10% D2O; 90% H2O 120mM 7.0 ambient 293 2 3D_15N-separated_NOESY 1.38mM 13C,15N-labeled protein; 20mM d-Tris-HCl(pH 7.0); 100mM NaCl; 1mM d-DTT; 0.02% NaN3; 10% D2O; 90% H2O 10% D2O; 90% H2O 120mM 7.0 ambient 293
NMR Spectrometer Information Spectrometer Manufacturer Model Field Strength 1 Varian INOVA 900 2 Varian INOVA 800
NMR Refinement Method Details Software torsion angle dynamics VNMR
NMR Ensemble Information Conformer Selection Criteria target function,structures with the least restraint violations Conformers Calculated Total Number 100 Conformers Submitted Total Number 20 Representative Model 1 (lowest energy)
Computation: NMR Software # Classification Version Software Name Author 1 collection VNMR 6.1C Varian 2 processing NMRPipe 20031121 Delaglio, F. 3 data analysis NMRView 5.0.4 Johnson, B. A. 4 data analysis KUJIRA 0.932 Kobayashi, N. 5 structure solution CYANA 2.0.17 Guntert, P. 6 refinement CYANA 2.0.17 Guntert, P.