X-RAY DIFFRACTION

Crystallization

Crystalization Experiments
IDMethodpHTemperatureDetails
1VAPOR DIFFUSION, SITTING DROP7.52930,2M NaCl; 0,1M HEPES ph 7,5, 25% w/v PEG 3350, pH 7.5, VAPOR DIFFUSION, SITTING DROP, temperature 293K
2VAPOR DIFFUSION, SITTING DROP7.52770,2 M NaCl, 0,1M HEPES, 25% w/v PEG 3350, pH 7.5, VAPOR DIFFUSION, SITTING DROP, temperature 277K

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 47.84α = 90
b = 92.18β = 90
c = 37.11γ = 90
Symmetry
Space GroupP 21 21 2

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-ray100CCDMARRESEARCH2005-03-16MSINGLE WAVELENGTH
21x-ray100CCDMARRESEARCH2005-07-06MMAD
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1SYNCHROTRONMPG/DESY, HAMBURG BEAMLINE BW61.05MPG/DESY, HAMBURGBW6
2SYNCHROTRONMPG/DESY, HAMBURG BEAMLINE BW60.9793 0.9796 0.9500MPG/DESY, HAMBURGBW6

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
1,21.646.0894212052
Highest Resolution Shell
ID #Resolution (High)Resolution (Low)Percent Possible (All)Percent Possible (Observed)Mean I Over Sigma (Observed)RedundancyNumber Unique Reflections (All)
1.61.786.4

Refinement

Statistics
Diffraction IDStructure Solution MethodCross Validation methodResolution (High)Resolution (Low)Number Reflections (All)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-Factor (All)R-Factor (Observed)R-WorkR-FreeR-Free Selection DetailsMean Isotropic B
X-RAY DIFFRACTIONMADTHROUGHOUT1.6202091920919114299.950.207450.207450.205350.24719RANDOM16.128
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
-0.310.69-0.39
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg31.813
r_dihedral_angle_4_deg23.529
r_dihedral_angle_3_deg12.807
r_dihedral_angle_1_deg3.99
r_scangle_it3.421
r_scbond_it2.2
r_mcangle_it1.343
r_angle_refined_deg1.229
r_mcbond_it0.811
r_nbtor_refined0.307
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg31.813
r_dihedral_angle_4_deg23.529
r_dihedral_angle_3_deg12.807
r_dihedral_angle_1_deg3.99
r_scangle_it3.421
r_scbond_it2.2
r_mcangle_it1.343
r_angle_refined_deg1.229
r_mcbond_it0.811
r_nbtor_refined0.307
r_symmetry_hbond_refined0.237
r_nbd_refined0.211
r_symmetry_vdw_refined0.179
r_xyhbond_nbd_refined0.142
r_chiral_restr0.078
r_bond_refined_d0.01
r_gen_planes_refined0.005
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms1199
Nucleic Acid Atoms
Solvent Atoms200
Heterogen Atoms

Software

Software
Software NamePurpose
REFMACrefinement
MOSFLMdata reduction
CCP4data scaling
SHARPphasing