2D0Q

Complex of Fe-type NHase with Cyclohexyl isocyanide, photo-activated for 1hr at 277K


X-RAY DIFFRACTION

Crystallization

Crystalization Experiments
IDMethodpHTemperatureDetails
1VAPOR DIFFUSION, HANGING DROP7.5277PEG8000, magnesium chloride, pH 7.5, VAPOR DIFFUSION, HANGING DROP, temperature 277K
Crystal Properties
Matthews coefficientSolvent content
2.549.6

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 114.352α = 90
b = 60.201β = 125.1
c = 81.585γ = 90
Symmetry
Space GroupC 1 2 1

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-ray100IMAGE PLATERIGAKU RAXIS2001-05-17MSINGLE WAVELENGTH
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1SYNCHROTRONSPRING-8 BEAMLINE BL45XU1.02SPring-8BL45XU

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
11.6540.2297.75342853428
Highest Resolution Shell
ID #Resolution (High)Resolution (Low)Percent Possible (All)Percent Possible (Observed)Mean I Over Sigma (Observed)RedundancyNumber Unique Reflections (All)
1.651.7183.2

Refinement

Statistics
Diffraction IDStructure Solution MethodCross Validation methodResolution (High)Resolution (Low)Number Reflections (All)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-Factor (All)R-Factor (Observed)R-WorkR-FreeR-Free Selection DetailsMean Isotropic B
X-RAY DIFFRACTIONMOLECULAR REPLACEMENTTHROUGHOUT1.6540.224809748097537397.640.15540.154390.154390.16455RANDOM15.455
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
0.350.240.75-0.83
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg34.734
r_dihedral_angle_4_deg18.457
r_dihedral_angle_3_deg11.45
r_dihedral_angle_1_deg5.373
r_scangle_it2.701
r_scbond_it1.666
r_mcangle_it1.133
r_angle_refined_deg1.131
r_mcbond_it0.934
r_nbtor_refined0.308
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg34.734
r_dihedral_angle_4_deg18.457
r_dihedral_angle_3_deg11.45
r_dihedral_angle_1_deg5.373
r_scangle_it2.701
r_scbond_it1.666
r_mcangle_it1.133
r_angle_refined_deg1.131
r_mcbond_it0.934
r_nbtor_refined0.308
r_nbd_refined0.218
r_symmetry_vdw_refined0.158
r_xyhbond_nbd_refined0.102
r_symmetry_hbond_refined0.096
r_metal_ion_refined0.089
r_symmetry_metal_ion_refined0.086
r_chiral_restr0.079
r_bond_refined_d0.008
r_gen_planes_refined0.004
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms3233
Nucleic Acid Atoms
Solvent Atoms585
Heterogen Atoms15

Software

Software
Software NamePurpose
REFMACrefinement
HKL-2000data reduction
SCALEPACKdata scaling
CNSphasing