2CZP

Structural analysis of membrane-bound mastoparan-X by solid-state NMR


SOLID-STATE NMR
NMR Experiment
ExperimentTypeSample ContentsSolventIonic StrengthpHPressureTemperature (K)Spectrometer
13D_N-CA-CO2mg or 5mg uniformly 13C, 15N labeled MP-X bound to membrane: Molar ratio MP-X:membrane=1:20membrane DPPC:DPPG=4:1 relative humidity 32%7.4ambient253
23D_Ni-COi+1-CAi+12mg or 5mg uniformly 13C, 15N labeled MP-X bound to membrane: Molar ratio MP-X:membrane=1:20membrane DPPC:DPPG=4:1 relative humidity 32%7.4ambient253
32D_RFDR2mg or 5mg uniformly 13C, 15N labeled MP-X bound to membrane: Molar ratio MP-X:membrane=1:20membrane DPPC:DPPG=4:1 relative humidity 32%7.4ambient253
42D_SPCz52mg or 5mg uniformly 13C, 15N labeled MP-X bound to membrane: Molar ratio MP-X:membrane=1:20membrane DPPC:DPPG=4:1 relative humidity 32%7.4ambient253
52D_(CACB)i+1-(COCA)i2mg or 5mg uniformly 13C, 15N labeled MP-X bound to membrane: Molar ratio MP-X:membrane=1:20membrane DPPC:DPPG=4:1 relative humidity 32%7.4ambient283
62D_Ni-(COCA)i+12mg or 5mg uniformly 13C, 15N labeled MP-X bound to membrane: Molar ratio MP-X:membrane=1:20membrane DPPC:DPPG=4:1 relative humidity 32%7.4ambient283
72D_N-CA2mg or 5mg uniformly 13C, 15N labeled MP-X bound to membrane: Molar ratio MP-X:membrane=1:20membrane DPPC:DPPG=4:1 relative humidity 32%7.4ambient283
82D_Ni-(COCACB)i+12mg or 5mg uniformly 13C, 15N labeled MP-X bound to membrane: Molar ratio MP-X:membrane=1:20membrane DPPC:DPPG=4:1 relative humidity 32%7.4ambient253
9RR2mg selectively 13C labeled MP-X bound to membrane: Molar ratio MP-X:membrane=1:20membrane DPPC:DPPG=4:1 relative humidity 32%7.4ambient283
10REDOR2mg selectively 13C, 15N labeled MP-X bound to membrane: Molar ratio MP-X:membrane=1:20membrane DPPC:DPPG=4:1 relative humidity 32%7.4ambient253
NMR Spectrometer Information
SpectrometerManufacturerModelField Strength
1VarianCMX500
2VarianCMX600
NMR Refinement
MethodDetailsSoftware
simulated annealingthe structures are based on a total of 31 restraints, 5 distance restraints derived by RR and REDOR experiments and 26 dihedral angle restraints predicted by TALOS.Felix
NMR Ensemble Information
Conformer Selection Criteriastructures with the lowest energy
Conformers Calculated Total Number100
Conformers Submitted Total Number10
Representative Model1 (closest to the average)
Additional NMR Experimental Information
DetailsThe structure was determined using triple-resonance 1H/13C/15N and double-resonance 1H/13C probes with 4mm and 3.2mm spinner modules.
Computation: NMR Software
#ClassificationVersionSoftware NameAuthor
1processingFelix2000Accelrys Inc.
2structure solutionCYANA1.0.6Guentert
3data analysisTALOS2003.027.13.05Delaglio
4refinementCYANA1.0.6Guentert