2CCP

X-RAY STRUCTURES OF RECOMBINANT YEAST CYTOCHROME C PEROXIDASE AND THREE HEME-CLEFT MUTANTS PREPARED BY SITE-DIRECTED MUTAGENESIS


X-RAY DIFFRACTION

Crystallization

Crystal Properties
Matthews coefficientSolvent content
2.6553.5

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 104.93α = 90
b = 74.26β = 90
c = 45.88γ = 90
Symmetry
Space GroupP 21 21 21

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-ray

Refinement

Statistics
Diffraction IDStructure Solution MethodResolution (High)Resolution (Low)Number Reflections (R-Free)Percent Reflections (Observed)R-Factor (Observed)R-WorkR-FreeMean Isotropic B
X-RAY DIFFRACTION2.20.147
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
RMS Deviations
KeyRefinement Restraint Deviation
p_orthonormal_tor28.4
p_staggered_tor19
p_scangle_it5.1
p_mcangle_it3.7
p_planar_tor3.5
p_scbond_it3.4
p_mcbond_it2.5
p_xhyhbond_nbd0.21
p_multtor_nbd0.19
p_chiral_restr0.171
RMS Deviations
KeyRefinement Restraint Deviation
p_orthonormal_tor28.4
p_staggered_tor19
p_scangle_it5.1
p_mcangle_it3.7
p_planar_tor3.5
p_scbond_it3.4
p_mcbond_it2.5
p_xhyhbond_nbd0.21
p_multtor_nbd0.19
p_chiral_restr0.171
p_singtor_nbd0.17
p_planar_d0.047
p_angle_d0.037
p_plane_restr0.016
p_bond_d0.014
p_angle_deg
p_hb_or_metal_coord
p_xyhbond_nbd
p_transverse_tor
p_special_tor
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms2339
Nucleic Acid Atoms
Solvent Atoms245
Heterogen Atoms43

Software

Software
Software NamePurpose
JIMINrefinement
LALSrefinement