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14-3-3 Protein Beta (Human) in complex with exoenzyme S peptide
Starting Model(s) Initial Refinement Model(s) Type Source Accession Code Details experimental model PDB 2BQ0 PDB ENTRY 2BQ0
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 8 0.05M MGCL2,0.1M HEPES PH7.5, 30% PEG MME 550, pH 8.00
Crystal Properties Matthews coefficient Solvent content 2.81 55.9
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 59.908 α = 90 b = 86.841 β = 90 c = 121.814 γ = 90
Symmetry Space Group C 2 2 21
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD ADSC CCD 2005-07-03 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON SLS BEAMLINE X10SA SLS X10SA
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2.65 49.33 99.9 0.14 13.4 6.7 9558
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 2.65 2.79 100 0.43 3 6.8
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Starting model Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT PDB ENTRY 2BQ0 2.65 60.86 8996 538 99.8 0.224 0.221 0.2285 0.286 0.286 RANDOM 61.64
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -0.68 5.46 -4.78
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 40.408 r_dihedral_angle_4_deg 18.932 r_dihedral_angle_3_deg 18.317 r_scangle_it 10.614 r_scbond_it 8.57 r_dihedral_angle_1_deg 7.033 r_mcangle_it 5.636 r_mcbond_it 3.908 r_angle_refined_deg 1.555 r_angle_other_deg 0.874
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 40.408 r_dihedral_angle_4_deg 18.932 r_dihedral_angle_3_deg 18.317 r_scangle_it 10.614 r_scbond_it 8.57 r_dihedral_angle_1_deg 7.033 r_mcangle_it 5.636 r_mcbond_it 3.908 r_angle_refined_deg 1.555 r_angle_other_deg 0.874 r_nbd_refined 0.249 r_symmetry_hbond_refined 0.249 r_symmetry_vdw_other 0.198 r_nbtor_refined 0.192 r_nbd_other 0.175 r_xyhbond_nbd_refined 0.168 r_symmetry_vdw_refined 0.115 r_nbtor_other 0.089 r_chiral_restr 0.085 r_bond_refined_d 0.016 r_gen_planes_refined 0.005 r_bond_other_d 0.002 r_gen_planes_other 0.001 r_xyhbond_nbd_other r_metal_ion_refined r_metal_ion_other r_symmetry_hbond_other r_symmetry_metal_ion_refined r_symmetry_metal_ion_other r_mcbond_other r_mcangle_other r_scbond_other r_scangle_other r_long_range_B_refined r_long_range_B_other r_rigid_bond_restr r_sphericity_free r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 1839 Nucleic Acid Atoms Solvent Atoms Heterogen Atoms
Software Software Software Name Purpose REFMAC refinement MOSFLM data reduction SCALA data scaling PHASER phasing