X-RAY DIFFRACTION

Crystallization

Crystalization Experiments
IDMethodpHTemperatureDetails
14.60.2M AMMONIUM SULPHATE, 0.1M SODIUM ACETATE PH4.6, 30PERCENT PEGMME 2000, WITH ADDITION OF CALCIUM ACETATE, pH 4.60
Crystal Properties
Matthews coefficientSolvent content
237

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 98.037α = 90
b = 29.788β = 121.48
c = 57.278γ = 90
Symmetry
Space GroupC 1 2 1

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-ray100CCDADSC CCDMIRROR2004-04-28MSINGLE WAVELENGTH
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1SYNCHROTRONESRF BEAMLINE ID14-2ESRFID14-2

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)R Merge I (Observed)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
11.540930.132.63.6212202
Highest Resolution Shell
ID #Resolution (High)Resolution (Low)Percent Possible (All)Percent Possible (Observed)R Merge I (Observed)Mean I Over Sigma (Observed)RedundancyNumber Unique Reflections (All)
11.51.5887.70.311.83.3

Refinement

Statistics
Diffraction IDStructure Solution MethodCross Validation methodStarting modelResolution (High)Resolution (Low)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-Factor (Observed)R-WorkR-FreeR-Free Selection DetailsMean Isotropic B
X-RAY DIFFRACTIONMOLECULAR REPLACEMENTTHROUGHOUTPDB ENTRIES 1HA4, 1HK0, 1OKI, C-TERMINAL DOMAINS SUPERIMPOSED1.5517.0118382987930.1730.1690.245RANDOM12.46
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg31.177
r_dihedral_angle_3_deg12.852
r_scangle_it6.311
r_dihedral_angle_1_deg5.912
r_mcangle_it5.083
r_scbond_it4.777
r_mcbond_it4.373
r_angle_refined_deg1.239
r_angle_other_deg0.739
r_symmetry_vdw_refined0.317
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg31.177
r_dihedral_angle_3_deg12.852
r_scangle_it6.311
r_dihedral_angle_1_deg5.912
r_mcangle_it5.083
r_scbond_it4.777
r_mcbond_it4.373
r_angle_refined_deg1.239
r_angle_other_deg0.739
r_symmetry_vdw_refined0.317
r_nbd_refined0.193
r_nbtor_refined0.182
r_nbd_other0.174
r_symmetry_hbond_refined0.155
r_xyhbond_nbd_refined0.153
r_symmetry_vdw_other0.145
r_nbtor_other0.087
r_chiral_restr0.083
r_bond_refined_d0.01
r_gen_planes_refined0.005
r_bond_other_d0.001
r_gen_planes_other0.001
r_dihedral_angle_4_deg
r_xyhbond_nbd_other
r_metal_ion_refined
r_metal_ion_other
r_symmetry_hbond_other
r_symmetry_metal_ion_refined
r_symmetry_metal_ion_other
r_mcbond_other
r_mcangle_other
r_scbond_other
r_scangle_other
r_long_range_B_refined
r_long_range_B_other
r_rigid_bond_restr
r_sphericity_free
r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms1278
Nucleic Acid Atoms
Solvent Atoms121
Heterogen Atoms13

Software

Software
Software NamePurpose
REFMACrefinement
MOSFLMdata reduction
SCALAdata scaling
PHASERphasing