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The structure of Hydroxypropylphosphonic acid epoxidase from S. wedmorenis.
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 7.5 2.1 M AMMONIUM SULPHATE, 100 MM TRIS-HCL PH 7.5
Crystal Properties Matthews coefficient Solvent content 2.27 45.36
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 86.363 α = 90 b = 86.363 β = 90 c = 221.44 γ = 120
Symmetry Space Group P 65 2 2
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD MARRESEARCH 2004-04-20 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON ESRF BEAMLINE BM14 ESRF BM14
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.7 30 98.5 0.05 41.5 11.8 53414 2
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 1.7 1.76 82.7 0.27 4.9
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION OTHER THROUGHOUT 1.7 30 50567 2716 97.6 0.191 0.188 0.1902 0.23 RANDOM 27.73
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 0.41 0.2 0.41 -0.61
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 34.439 r_dihedral_angle_3_deg 13.313 r_dihedral_angle_4_deg 12.466 r_scangle_it 6.548 r_dihedral_angle_1_deg 6.203 r_scbond_it 4.927 r_mcangle_it 3.508 r_mcbond_it 2.484 r_angle_refined_deg 1.44 r_nbtor_refined 0.309
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 34.439 r_dihedral_angle_3_deg 13.313 r_dihedral_angle_4_deg 12.466 r_scangle_it 6.548 r_dihedral_angle_1_deg 6.203 r_scbond_it 4.927 r_mcangle_it 3.508 r_mcbond_it 2.484 r_angle_refined_deg 1.44 r_nbtor_refined 0.309 r_symmetry_vdw_refined 0.229 r_nbd_refined 0.219 r_xyhbond_nbd_refined 0.172 r_symmetry_hbond_refined 0.15 r_chiral_restr 0.105 r_bond_refined_d 0.012 r_gen_planes_refined 0.006 r_bond_other_d r_angle_other_deg r_gen_planes_other r_nbd_other r_nbtor_other r_xyhbond_nbd_other r_metal_ion_refined r_metal_ion_other r_symmetry_vdw_other r_symmetry_hbond_other r_symmetry_metal_ion_refined r_symmetry_metal_ion_other r_mcbond_other r_mcangle_other r_scbond_other r_scangle_other r_long_range_B_refined r_long_range_B_other r_rigid_bond_restr r_sphericity_free r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 2944 Nucleic Acid Atoms Solvent Atoms 547 Heterogen Atoms 77
Software Software Software Name Purpose REFMAC refinement HKL-2000 data reduction SCALEPACK data scaling