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p38alpha bound to pyrazolourea
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, HANGING DROP 6.5 298 6-10% PEG-MME 5000 , pH 6.5, VAPOR DIFFUSION, HANGING DROP, temperature 298.0K
Crystal Properties Matthews coefficient Solvent content 2.06 40.4
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 59 α = 90 b = 67.104 β = 90 c = 87.7 γ = 90
Symmetry Space Group P 21 21 21
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD ADSC QUANTUM 4 2002-04-19 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON SRS BEAMLINE PX9.6 0.87 SRS PX9.6
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2.25 53.5 100 17097 17097
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 2.25 2.37 83.2
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (All) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (All) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 2.25 30 16176 15363 813 94.68 0.22131 0.22131 0.21711 0.2213 0.30281 0.2177 RANDOM 23.763
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -2.58 -3.25 5.84
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_1_deg 6.791 r_scangle_it 2.991 r_scbond_it 1.801 r_angle_refined_deg 1.64 r_mcangle_it 1.354 r_angle_other_deg 0.869 r_mcbond_it 0.757 r_symmetry_vdw_other 0.305 r_symmetry_vdw_refined 0.266 r_nbd_other 0.229
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_1_deg 6.791 r_scangle_it 2.991 r_scbond_it 1.801 r_angle_refined_deg 1.64 r_mcangle_it 1.354 r_angle_other_deg 0.869 r_mcbond_it 0.757 r_symmetry_vdw_other 0.305 r_symmetry_vdw_refined 0.266 r_nbd_other 0.229 r_xyhbond_nbd_refined 0.212 r_nbd_refined 0.211 r_symmetry_hbond_refined 0.163 r_nbtor_other 0.091 r_chiral_restr 0.09 r_bond_refined_d 0.016 r_gen_planes_refined 0.006 r_gen_planes_other 0.005 r_bond_other_d 0.002
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 2718 Nucleic Acid Atoms Solvent Atoms 106 Heterogen Atoms 27
Software Software Software Name Purpose REFMAC refinement MOSFLM data reduction CCP4 data scaling AMoRE phasing