2AYM
Solution Structure of Drosophila melanogaster SNF RBD2
SOLUTION NMR
| NMR Experiment | ||||||||
|---|---|---|---|---|---|---|---|---|
| Experiment | Type | Sample Contents | Solvent | Ionic Strength | pH | Pressure | Temperature (K) | Spectrometer |
| 1 | 3D_13C-separated_NOESY | 1mM SNF RBD2 U-15N,13C; 50mM phosphate buffer NA; 1mM EDTA; 50mM NaCl; 90% H2O, 10% D2O | 90% H2O/10% D2O | 250mM | 7.2 | ambient | 298 | |
| 2 | 3D_15N-separated_NOESY | 1mM SNF RBD2 U-15N,13C; 50mM phosphate buffer NA; 1mM EDTA; 50mM NaCl; 90% H2O, 10% D2O | 90% H2O/10% D2O | 250mM | 7.2 | ambient | 298 | |
| NMR Spectrometer Information | |||
|---|---|---|---|
| Spectrometer | Manufacturer | Model | Field Strength |
| 1 | Bruker | AVANCE | 600 |
| NMR Refinement | ||
|---|---|---|
| Method | Details | Software |
| simulated annealing molecular dynamics | the structure was based on total 3828 restraints. 3715 are NOE derived distance constraints, 61 are dihedral angle restraints, 52 are distance restraints from hydrogen bonds. | XwinNMR |
| NMR Ensemble Information | |
|---|---|
| Conformer Selection Criteria | structures with the lowest energy |
| Conformers Calculated Total Number | 200 |
| Conformers Submitted Total Number | 20 |
| Representative Model | 1 (lowest energy) |
| Additional NMR Experimental Information | |
|---|---|
| Details | This structure was determined using standard 3D heteronuclear techaniques |
| Computation: NMR Software | ||||
|---|---|---|---|---|
| # | Classification | Version | Software Name | Author |
| 1 | collection | XwinNMR | 3.5 | Bruker |
| 2 | processing | NMRPipe | 2.1 | Frank Delaglio |
| 3 | data analysis | NMRView | 5 | Bruce Johnson |
| 4 | structure solution | CYANA | 1.0.6 | Peter Guntert |
| 5 | refinement | Amber | 7.0 | David Case |
