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Human DRP-1 kinase, W305S S308A D40 mutant, crystal form with 8 monomers in the asymmetric unit
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, HANGING DROP 7.4 295 ammonium sulfate, pH 7.4, VAPOR DIFFUSION, HANGING DROP, temperature 295K
Crystal Properties Matthews coefficient Solvent content 3.8 67
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 159.12 α = 90 b = 113.35 β = 95.09 c = 247.31 γ = 90
Symmetry Space Group C 1 2 1
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 IMAGE PLATE MARRESEARCH 2003-09-11 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON EMBL/DESY, HAMBURG BEAMLINE BW7B 0.8416 EMBL/DESY, HAMBURG BW7B
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Sym I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 3 35 99.8 0.081 11.4 3.4 87689 87689 -3 -3 63
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R-Sym I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 3 3.2 99.9 0.434 2.8 3.4 15360
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (All) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (All) R-Factor (Observed) R-Work (Depositor) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 3 20 87443 87443 4395 100 0.21852 0.21852 0.21744 0.23844 0.2717 RANDOM 94.853
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 7.37 -1.68 -1.44 -6.23
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 36.213 r_dihedral_angle_3_deg 15.715 r_dihedral_angle_4_deg 12.897 r_dihedral_angle_1_deg 6.556 r_angle_refined_deg 1.142 r_scangle_it 1.095 r_mcangle_it 0.787 r_angle_other_deg 0.72 r_scbond_it 0.708 r_mcbond_it 0.599
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 36.213 r_dihedral_angle_3_deg 15.715 r_dihedral_angle_4_deg 12.897 r_dihedral_angle_1_deg 6.556 r_angle_refined_deg 1.142 r_scangle_it 1.095 r_mcangle_it 0.787 r_angle_other_deg 0.72 r_scbond_it 0.708 r_mcbond_it 0.599 r_symmetry_vdw_other 0.322 r_symmetry_hbond_refined 0.276 r_symmetry_vdw_refined 0.26 r_nbd_other 0.202 r_mcbond_other 0.201 r_nbd_refined 0.197 r_xyhbond_nbd_refined 0.146 r_nbtor_other 0.084 r_chiral_restr 0.067 r_bond_refined_d 0.009 r_gen_planes_refined 0.003 r_bond_other_d 0.002 r_gen_planes_other 0.002
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 19763 Nucleic Acid Atoms Solvent Atoms 176 Heterogen Atoms 64
Software Software Software Name Purpose REFMAC refinement XDS data reduction XDS data scaling MOLREP phasing