21HJ | pdb_000021hj

Solution structures of BRD9 bromodomain in complex with histone H3 lactyl-lysine 18 (H3K18la) peptide


SOLUTION NMR
NMR Experiment
ExperimentTypeSample ContentsSolventIonic StrengthpHPressureTemperature (K)Spectrometer
13D HNCACB500 mM sodium chloride, 2.7 mM potassium chloride, 10 mM sodium phosphate, 1.8 mM potassium phosphate, 2 mM DTT90% H2O/10% D2Onull7.41 atm298Bruker AVANCE 600
23D HN(COCA)CB500 mM sodium chloride, 2.7 mM potassium chloride, 10 mM sodium phosphate, 1.8 mM potassium phosphate, 2 mM DTT90% H2O/10% D2Onull7.41 atm298Bruker AVANCE 600
33D HNCA500 mM sodium chloride, 2.7 mM potassium chloride, 10 mM sodium phosphate, 1.8 mM potassium phosphate, 2 mM DTT90% H2O/10% D2Onull7.41 atm298Bruker AVANCE 600
43D HN(CO)CA500 mM sodium chloride, 2.7 mM potassium chloride, 10 mM sodium phosphate, 1.8 mM potassium phosphate, 2 mM DTT90% H2O/10% D2Onull7.41 atm298Bruker AVANCE 600
53D 1H-15N NOESY500 mM sodium chloride, 2.7 mM potassium chloride, 10 mM sodium phosphate, 1.8 mM potassium phosphate, 2 mM DTT90% H2O/10% D2Onull7.41 atm298Bruker AVANCE 800
63D 1H-13C NOESY aliphatic500 mM sodium chloride, 2.7 mM potassium chloride, 10 mM sodium phosphate, 1.8 mM potassium phosphate, 2 mM DTT100% D2Onull7.41 atm298Bruker AVANCE 800
73D 1H-13C NOESY aromatic500 mM sodium chloride, 2.7 mM potassium chloride, 10 mM sodium phosphate, 1.8 mM potassium phosphate, 2 mM DTT100% D2Onull7.41 atm298Bruker AVANCE 800
83D filtered-1H-13C NOESY aliphatic500 mM sodium chloride, 2.7 mM potassium chloride, 10 mM sodium phosphate, 1.8 mM potassium phosphate, 2 mM DTT100% D2Onull7.41 atm298Bruker AVANCE 800
NMR Spectrometer Information
SpectrometerManufacturerModelField Strength
1BrukerAVANCE800
2BrukerAVANCE600
NMR Refinement
MethodDetailsSoftware
torsion angle dynamicsCNS
NMR Ensemble Information
Conformer Selection Criteriastructures with the lowest energy
Conformers Calculated Total Number200
Conformers Submitted Total Number20
Representative Model1 (lowest energy)
Computation: NMR Software
#ClassificationVersionSoftware NameAuthor
1refinementARIALinge, O'Donoghue and Nilges
2structure calculationCNSBrunger, Adams, Clore, Gros, Nilges and Read
3chemical shift assignmentNMRViewJohnson, One Moon Scientific
4peak pickingNMRViewJohnson, One Moon Scientific
5collectionTopSpinBruker Biospin
6processingNMRPipeDelaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax