1Y6U

The Structure of the Excisionase (Xis) Protein from Conjugative Transposon Tn916 Provides Insights into the Regulation of Heterobivalent Tyrosine Recombinases


SOLUTION NMR
NMR Experiment
ExperimentTypeSample ContentsSolventIonic StrengthpHPressureTemperature (K)Spectrometer
13D_13C-separated_NOESY1 mM 15N/13C labeled Xis, 30 mM NaOAc, 60 mM NaCl, 93% H2O, 7% D2O30 mM NaOAc, pH 4.5, 60 mM NaCl, 93% H2O, 7% D2O60 mM NaCl4.5Ambient303
23D_15N-separated_NOESY1 mM 15N/13C labeled Xis, 30 mM NaOAc, 60 mM NaCl, 93% H2O, 7% D2O30 mM NaOAc, pH 4.5, 60 mM NaCl, 93% H2O, 7% D2O60 mM NaCl4.5Ambient303
34D_13C/15N-separated_NOESY1 mM 15N/13C labeled Xis, 30 mM NaOAc, 60 mM NaCl, 93% H2O, 7% D2O30 mM NaOAc, pH 4.5, 60 mM NaCl, 93% H2O, 7% D2O60 mM NaCl4.5Ambient303
4HNCA-J1 mM 15N/13C labeled Xis, 30 mM NaOAc, 60 mM NaCl, 93% H2O, 7% D2O30 mM NaOAc, pH 4.5, 60 mM NaCl, 93% H2O, 7% D2O60 mM NaCl4.5Ambient303
5HNHA1 mM 15N/13C labeled Xis, 30 mM NaOAc, 60 mM NaCl, 93% H2O, 7% D2O30 mM NaOAc, pH 4.5, 60 mM NaCl, 93% H2O, 7% D2O60 mM NaCl4.5Ambient303
NMR Spectrometer Information
SpectrometerManufacturerModelField Strength
1BrukerDRX600
2BrukerDRX500
NMR Refinement
MethodDetailsSoftware
Hybrid distance geometry and simulated annealing calculationsXwinNMR
NMR Ensemble Information
Conformer Selection Criteriastructures with the lowest energy
Conformers Calculated Total Number200
Conformers Submitted Total Number20
Representative Model1 (lowest energy)
Computation: NMR Software
#ClassificationVersionSoftware NameAuthor
1collectionXwinNMR2.6
2processingX-PLOR3.1
3processingNMRPipesgi6x
4data analysisPIPP4.3.5
5refinementXPLOR-NIH