X-RAY DIFFRACTION

Crystallization

Crystalization Experiments
IDMethodpHTemperatureDetails
1VAPOR DIFFUSION, HANGING DROP6.5298PEG5K MME, CdCl2, CaCl2, MES, pH 6.5, VAPOR DIFFUSION, HANGING DROP, temperature 298K
Crystal Properties
Matthews coefficientSolvent content
3.1260.3

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 68.033α = 90
b = 68.033β = 90
c = 191.733γ = 120
Symmetry
Space GroupP 32 2 1

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-ray100CCDADSC QUANTUM 42003-06-27MSINGLE WAVELENGTH
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1SYNCHROTRONNSLS BEAMLINE X12B0.97960NSLSX12B

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
11.764.555781754348
Highest Resolution Shell
ID #Resolution (High)Resolution (Low)Percent Possible (All)Percent Possible (Observed)Mean I Over Sigma (Observed)RedundancyNumber Unique Reflections (All)
11.71.760.94

Refinement

Statistics
Diffraction IDStructure Solution MethodCross Validation methodResolution (High)Resolution (Low)Number Reflections (All)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-Factor (Observed)R-WorkR-FreeR-Free Selection DetailsMean Isotropic B
X-RAY DIFFRACTIONSADTHROUGHOUT1.70237.25781751554277194.60.240880.238240.28935RANDOM26.669
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
0.350.170.35-0.52
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_1_deg7.748
r_scangle_it5.922
r_scbond_it4.009
r_mcangle_it2.708
r_angle_refined_deg2.388
r_mcbond_it1.618
r_angle_other_deg1.147
r_metal_ion_refined0.515
r_symmetry_hbond_refined0.506
r_symmetry_vdw_refined0.363
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_1_deg7.748
r_scangle_it5.922
r_scbond_it4.009
r_mcangle_it2.708
r_angle_refined_deg2.388
r_mcbond_it1.618
r_angle_other_deg1.147
r_metal_ion_refined0.515
r_symmetry_hbond_refined0.506
r_symmetry_vdw_refined0.363
r_nbd_refined0.331
r_xyhbond_nbd_refined0.315
r_nbd_other0.271
r_symmetry_vdw_other0.27
r_chiral_restr0.162
r_nbtor_other0.096
r_bond_refined_d0.031
r_gen_planes_refined0.011
r_bond_other_d0.003
r_gen_planes_other0.002
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms2721
Nucleic Acid Atoms
Solvent Atoms388
Heterogen Atoms19

Software

Software
Software NamePurpose
REFMACrefinement
DENZOdata reduction
SCALEPACKdata scaling
SOLVEphasing