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Crystal Structure of the Interface Closed Conformation of 11b-hydroxysteroid dehydrogenase isozyme 1
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION 7 298 PEG, MES buffer, pH 7.0, VAPOR DIFFUSION, temperature 298K
Crystal Properties Matthews coefficient Solvent content 2.5 51
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 57.428 α = 90 b = 152.673 β = 93.77 c = 73.918 γ = 90
Symmetry Space Group P 1 21 1
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD ADSC QUANTUM 4 2003-06-01 M MAD
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON ALS BEAMLINE 5.0.3 1.00 ALS 5.0.3
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Sym I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.55 20 0.04 20.9 169082 169082
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R-Sym I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1.55 1.61 88.3 0.314 2.2
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (All) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Free (Depositor) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MAD THROUGHOUT 1.55 20 160594 160594 8452 92.12 0.15801 0.15682 0.18085 RANDOM 15.437
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 0.56 -1.02 -0.29 -0.4
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_1_deg 5.888 r_scangle_it 3.34 r_scbond_it 2.026 r_angle_refined_deg 1.558 r_mcangle_it 1.178 r_angle_other_deg 0.961 r_mcbond_it 0.605 r_nbd_other 0.238 r_nbd_refined 0.226 r_symmetry_vdw_other 0.223
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_1_deg 5.888 r_scangle_it 3.34 r_scbond_it 2.026 r_angle_refined_deg 1.558 r_mcangle_it 1.178 r_angle_other_deg 0.961 r_mcbond_it 0.605 r_nbd_other 0.238 r_nbd_refined 0.226 r_symmetry_vdw_other 0.223 r_xyhbond_nbd_refined 0.167 r_symmetry_hbond_refined 0.126 r_chiral_restr 0.094 r_symmetry_vdw_refined 0.091 r_nbtor_other 0.085 r_bond_other_d 0.079 r_gen_planes_refined 0.02 r_gen_planes_other 0.018 r_bond_refined_d 0.011 r_dihedral_angle_2_deg r_dihedral_angle_3_deg r_dihedral_angle_4_deg r_nbtor_refined r_xyhbond_nbd_other r_metal_ion_refined r_metal_ion_other r_symmetry_hbond_other r_mcbond_other r_rigid_bond_restr r_sphericity_free r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 8258 Nucleic Acid Atoms Solvent Atoms 1259 Heterogen Atoms 372
Software Software Software Name Purpose REFMAC refinement HKL-2000 data reduction CCP4 data scaling SHARP phasing