☰ Navigation Tabs
Crystal structure of CaiB, a type III CoA transferase in carnitine metabolism
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, HANGING DROP 5.5 293 PEG 3350, Ammonium Sulphate, Glycerol, Sodium Chloride, Bis-tris, pH 5.5, VAPOR DIFFUSION, HANGING DROP, temperature 293K
Crystal Properties Matthews coefficient Solvent content 2.6 53
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 55.58 α = 90 b = 129.802 β = 109.48 c = 69.792 γ = 90
Symmetry Space Group P 1 21 1
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD MARRESEARCH 2003-12-09 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON BESSY BEAMLINE 14.1 0.980 BESSY 14.1
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) R Sym I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.85 30 96.8 0.092 0.092 5.82 3.76 76742 76742 -3 18
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R-Sym I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1.85 1.95 89.4 0.18 3.46 3.42
Refinement Statistics Diffraction ID Structure Solution Method Resolution (High) Resolution (Low) Number Reflections (All) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (All) R-Factor (Observed) R-Work (Depositor) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION SAD 1.85 30 72842 72842 3866 96.71 0.14515 0.14515 0.1434 0.17821 0.1978 RANDOM 17.513
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -0.49 0.07 0.69 -0.16
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_1_deg 5.928 r_scangle_it 4.228 r_scbond_it 2.771 r_mcangle_it 1.594 r_angle_refined_deg 1.485 r_mcbond_it 0.893 r_angle_other_deg 0.857 r_nbd_other 0.247 r_symmetry_vdw_refined 0.246 r_symmetry_vdw_other 0.229
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_1_deg 5.928 r_scangle_it 4.228 r_scbond_it 2.771 r_mcangle_it 1.594 r_angle_refined_deg 1.485 r_mcbond_it 0.893 r_angle_other_deg 0.857 r_nbd_other 0.247 r_symmetry_vdw_refined 0.246 r_symmetry_vdw_other 0.229 r_nbd_refined 0.224 r_xyhbond_nbd_refined 0.145 r_symmetry_hbond_refined 0.108 r_chiral_restr 0.094 r_nbtor_other 0.084 r_bond_refined_d 0.018 r_gen_planes_refined 0.008 r_gen_planes_other 0.008 r_bond_other_d 0.002
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 6254 Nucleic Acid Atoms Solvent Atoms 640 Heterogen Atoms 38
Software Software Software Name Purpose REFMAC refinement MOSFLM data reduction CCP4 data scaling SOLVE phasing