X-RAY DIFFRACTION

Crystallization

Crystalization Experiments
IDMethodpHTemperatureDetails
1VAPOR DIFFUSION, HANGING DROP6293MES, Ammonium sulfate, sodium iodide, dioxane, pH 6, VAPOR DIFFUSION, HANGING DROP, temperature 293K
Crystal Properties
Matthews coefficientSolvent content
2.4950.57

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 54.129α = 90
b = 62.781β = 101
c = 107.993γ = 90
Symmetry
Space GroupP 1 21 1

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-ray95CCDADSC QUANTUM 2102003-06-07MSINGLE WAVELENGTH
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1SYNCHROTRONPHOTON FACTORY BEAMLINE AR-NW12A1.0Photon FactoryAR-NW12A

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
11.855098.35973759737
Highest Resolution Shell
ID #Resolution (High)Resolution (Low)Percent Possible (All)Percent Possible (Observed)Mean I Over Sigma (Observed)RedundancyNumber Unique Reflections (All)
1.851.9297.6

Refinement

Statistics
Diffraction IDStructure Solution MethodCross Validation methodResolution (High)Resolution (Low)Number Reflections (All)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-Factor (All)R-Factor (Observed)R-WorkR-FreeR-Free Selection DetailsMean Isotropic B
X-RAY DIFFRACTIONMOLECULAR REPLACEMENTTHROUGHOUT1.85205364053640604998.120.167760.167760.163630.20428RANDOM15.173
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
-0.430.470.62-0.02
RMS Deviations
KeyRefinement Restraint Deviation
r_scangle_it5.705
r_dihedral_angle_1_deg5.376
r_scbond_it3.526
r_mcangle_it2.155
r_angle_refined_deg1.777
r_mcbond_it1.203
r_angle_other_deg0.988
r_nbd_other0.247
r_symmetry_vdw_other0.243
r_nbd_refined0.224
RMS Deviations
KeyRefinement Restraint Deviation
r_scangle_it5.705
r_dihedral_angle_1_deg5.376
r_scbond_it3.526
r_mcangle_it2.155
r_angle_refined_deg1.777
r_mcbond_it1.203
r_angle_other_deg0.988
r_nbd_other0.247
r_symmetry_vdw_other0.243
r_nbd_refined0.224
r_symmetry_hbond_refined0.16
r_xyhbond_nbd_refined0.152
r_symmetry_vdw_refined0.136
r_chiral_restr0.116
r_nbtor_other0.087
r_metal_ion_refined0.082
r_bond_refined_d0.021
r_gen_planes_other0.02
r_gen_planes_refined0.015
r_bond_other_d0.004
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms4964
Nucleic Acid Atoms
Solvent Atoms308
Heterogen Atoms154

Software

Software
Software NamePurpose
REFMACrefinement
HKL-2000data reduction
SCALEPACKdata scaling
CNSphasing