1UPN
COMPLEX OF ECHOVIRUS TYPE 12 WITH DOMAINS 3 AND 4 OF ITS RECEPTOR DECAY ACCELERATING FACTOR (CD55) BY CRYO ELECTRON MICROSCOPY AT 16 A
ELECTRON MICROSCOPY
| Sample |
|---|
| ECHOVIRUS TYPE 12 |
| Specimen Preparation | |
|---|---|
| Sample Aggregation State | PARTICLE |
| Vitrification Instrument | |
| Cryogen Name | ETHANE |
| Sample Vitrification Details | LIQUID ETHANE |
| Staining Type | NEGATIVE |
| Staining Material | Ammonium Molybdate |
| Staining Details | |
| 3D Reconstruction | |
|---|---|
| Reconstruction Method | SINGLE PARTICLE |
| Number of Particles | 903 |
| Reported Resolution (Å) | 16 |
| Resolution Method | FSC 0.5 CUT-OFF |
| Other Details | MAP BROUGHT TO P23 CRYSTAL WITH UNIT CELL DIMENSIONS OF 599.375 599.375 599.375 90.00 90.00 90.00. MODEL FOR EV11 DOCKED ONTO EV12 EM DENSITY. 0.5 A G ... |
| Refinement Type | |
| Symmetry Type | POINT |
| Point Symmetry | I |
| Map-Model Fitting and Refinement | |||||
|---|---|---|---|---|---|
| Id | 1 (1UPN) | ||||
| Refinement Space | REAL | ||||
| Refinement Protocol | OTHER | ||||
| Refinement Target | Cross-correlation coefficient | ||||
| Overall B Value | |||||
| Fitting Procedure | |||||
| Details | REFINEMENT PROTOCOL--X-RAY | ||||
| Data Acquisition | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| Detector Type | KODAK SO-163 FILM | ||||||||
| Electron Dose (electrons/Å**2) | |||||||||
| Imaging Experiment | 1 |
|---|---|
| Date of Experiment | 2002-07-15 |
| Temperature (Kelvin) | 108 |
| Microscope Model | JEOL 2000EXII |
| Minimum Defocus (nm) | 300 |
| Maximum Defocus (nm) | 2000 |
| Minimum Tilt Angle (degrees) | |
| Maximum Tilt Angle (degrees) | |
| Nominal CS | 3.4 |
| Imaging Mode | BRIGHT FIELD |
| Specimen Holder Model | |
| Nominal Magnification | 30000 |
| Calibrated Magnification | 29200 |
| Source | LAB6 |
| Acceleration Voltage (kV) | 120 |
| Imaging Details | PARTICLES SELECTED WITH X3D |
| EM Software | ||
|---|---|---|
| Task | Software Package | Version |
| RECONSTRUCTION | MRC IMAGE PROCESSING PACKAGE | |
