X-RAY DIFFRACTION

Crystallization

Crystalization Experiments
IDMethodpHTemperatureDetails
1VAPOR DIFFUSION, HANGING DROP7.1293Ammonium sulfate, pH 7.1, VAPOR DIFFUSION, HANGING DROP, temperature 293K
Crystal Properties
Matthews coefficientSolvent content
1.9636.78

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 34.223α = 72.35
b = 57.038β = 79.97
c = 57.768γ = 67.89
Symmetry
Space GroupP 1

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-ray100CCDOXFORD PX210mirrorsMSINGLE WAVELENGTH
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1SYNCHROTRONSPRING-8 BEAMLINE BL44XU0.9SPring-8BL44XU

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)R Sym I (Observed)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
11.643.593.40.04414.51.8507735077313.4
Highest Resolution Shell
ID #Resolution (High)Resolution (Low)Percent Possible (All)Percent Possible (Observed)R-Sym I (Observed)Mean I Over Sigma (Observed)RedundancyNumber Unique Reflections (All)
1.61.6679.90.1311.2

Refinement

Statistics
Diffraction IDStructure Solution MethodCross Validation methodResolution (High)Resolution (Low)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-Factor (Observed)R-WorkR-FreeR-Free Selection DetailsMean Isotropic B
X-RAY DIFFRACTIONMOLECULAR REPLACEMENTTHROUGHOUT1.633.345000236293.280.16570.164010.19854RANDOM12.765
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
-0.01-0.030.020.02
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_1_deg5.036
r_scangle_it3.983
r_scbond_it2.471
r_angle_refined_deg1.542
r_mcangle_it1.425
r_angle_other_deg0.936
r_mcbond_it0.764
r_symmetry_vdw_refined0.287
r_symmetry_vdw_other0.266
r_nbd_other0.247
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_1_deg5.036
r_scangle_it3.983
r_scbond_it2.471
r_angle_refined_deg1.542
r_mcangle_it1.425
r_angle_other_deg0.936
r_mcbond_it0.764
r_symmetry_vdw_refined0.287
r_symmetry_vdw_other0.266
r_nbd_other0.247
r_nbd_refined0.227
r_symmetry_hbond_refined0.224
r_xyhbond_nbd_refined0.176
r_chiral_restr0.094
r_nbtor_other0.085
r_bond_refined_d0.014
r_gen_planes_other0.01
r_gen_planes_refined0.009
r_bond_other_d0.003
r_dihedral_angle_2_deg
r_xyhbond_nbd_other
r_symmetry_hbond_other
r_rigid_bond_restr
r_sphericity_free
r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms3048
Nucleic Acid Atoms
Solvent Atoms496
Heterogen Atoms74

Software

Software
Software NamePurpose
REFMACrefinement
d*TREKdata reduction
d*TREKdata scaling
MOLREPphasing