X-RAY DIFFRACTION

Crystallization

Crystalization Experiments
IDMethodpHTemperatureDetails
16.52980.1M Sodium Cacodylate, 0.2M Ammonium Sulfate, 30% PEG 8000, pH 6.5, VAPOR DIFFUSION, HANGING DROP, temperature 298K, pH 6.50
Crystal Properties
Matthews coefficientSolvent content
2.1742.9

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 44.546α = 70.71
b = 55.017β = 89.88
c = 67.069γ = 85.61
Symmetry
Space GroupP 1

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-ray150CCDSBC-22004-05-31MSINGLE WAVELENGTH
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1SYNCHROTRONAPS BEAMLINE 19-BMAPS19-BM

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
11.633.88979080
Highest Resolution Shell
ID #Resolution (High)Resolution (Low)Percent Possible (All)Percent Possible (Observed)Mean I Over Sigma (Observed)RedundancyNumber Unique Reflections (All)
11.61.746.6

Refinement

Statistics
Diffraction IDStructure Solution MethodCross Validation methodResolution (High)Resolution (Low)Number Reflections (All)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-Factor (Observed)R-WorkR-FreeR-Free Selection DetailsMean Isotropic B
X-RAY DIFFRACTIONSADTHROUGHOUT1.663.257123765177356086.820.1730.1720.193RANDOM11.21
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
0.21-0.1-0.11-0.240.22-0.1
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_1_deg5.835
r_scangle_it3.295
r_scbond_it2.042
r_mcangle_it1.178
r_angle_refined_deg1.168
r_angle_other_deg0.742
r_mcbond_it0.62
r_symmetry_vdw_other0.267
r_symmetry_vdw_refined0.258
r_nbd_other0.246
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_1_deg5.835
r_scangle_it3.295
r_scbond_it2.042
r_mcangle_it1.178
r_angle_refined_deg1.168
r_angle_other_deg0.742
r_mcbond_it0.62
r_symmetry_vdw_other0.267
r_symmetry_vdw_refined0.258
r_nbd_other0.246
r_nbd_refined0.205
r_symmetry_hbond_refined0.167
r_xyhbond_nbd_refined0.139
r_nbtor_other0.08
r_chiral_restr0.07
r_bond_refined_d0.009
r_gen_planes_refined0.006
r_gen_planes_other0.005
r_bond_other_d0.002
r_dihedral_angle_2_deg
r_dihedral_angle_3_deg
r_dihedral_angle_4_deg
r_nbtor_refined
r_xyhbond_nbd_other
r_metal_ion_refined
r_metal_ion_other
r_symmetry_hbond_other
r_mcbond_other
r_rigid_bond_restr
r_sphericity_free
r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms4670
Nucleic Acid Atoms
Solvent Atoms544
Heterogen Atoms

Software

Software
Software NamePurpose
REFMACrefinement
d*TREKdata reduction
HKL-2000data scaling
autoSHARPphasing