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CRYSTAL STRUCTURE OF THE CATALYTIC CORE OF INOSITOL 1,4,5-TRISPHOSPHATE 3-KINASE
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, SITTING DROP 277 2.2M AMMONIUM sulfate, 0.2M SODIUM FORMATE, 10 mM DTT, VAPOR DIFFUSION, SITTING DROP, temperature 277K
Crystal Properties Matthews coefficient Solvent content 2.62 53.07
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 71.679 α = 90 b = 98.535 β = 90 c = 188.745 γ = 90
Symmetry Space Group C 2 2 21
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray M MAD
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2.2 50 32563
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MAD THROUGHOUT 2.2 38.92 30923 1640 100 0.25992 0.25748 0.2849 0.3052 0.2744 RANDOM 23.959
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -0.12 -2.26 2.38
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_3_deg 20.844 r_dihedral_angle_1_deg 3.956 r_scangle_it 3.194 r_scbond_it 2.121 r_angle_refined_deg 1.766 r_mcangle_it 1.262 r_mcbond_it 0.702 r_xyhbond_nbd_refined 0.495 r_nbd_refined 0.429 r_symmetry_vdw_refined 0.384
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_3_deg 20.844 r_dihedral_angle_1_deg 3.956 r_scangle_it 3.194 r_scbond_it 2.121 r_angle_refined_deg 1.766 r_mcangle_it 1.262 r_mcbond_it 0.702 r_xyhbond_nbd_refined 0.495 r_nbd_refined 0.429 r_symmetry_vdw_refined 0.384 r_symmetry_hbond_refined 0.278 r_chiral_restr 0.135 r_metal_ion_refined 0.098 r_bond_refined_d 0.014 r_gen_planes_refined 0.006 r_bond_other_d r_angle_other_deg r_dihedral_angle_2_deg r_dihedral_angle_4_deg r_gen_planes_other r_nbd_other r_nbtor_refined r_nbtor_other r_xyhbond_nbd_other r_metal_ion_other r_symmetry_vdw_other r_symmetry_hbond_other r_mcbond_other r_rigid_bond_restr r_sphericity_free r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 3913 Nucleic Acid Atoms Solvent Atoms 377 Heterogen Atoms 55
Software Software Software Name Purpose REFMAC refinement HKL-2000 data reduction SCALEPACK data scaling SOLVE phasing