1TSD

THYMIDYLATE SYNTHASE COMPLEX WITH 2'-DEOXYURIDINE 5'-MONOPHOSPHATE (DUMP) AND FOLATE ANALOG 1843U89


X-RAY DIFFRACTION

Crystallization

Crystal Properties
Matthews coefficientSolvent content
2.6253.07

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 127.52α = 90
b = 127.52β = 90
c = 68.25γ = 120
Symmetry
Space GroupP 63

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-rayDIFFRACTOMETERENRAF-NONIUS FAST1993-06-21M
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)R Merge I (Observed)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
11.9515980.0873.648550

Refinement

Statistics
Diffraction IDStructure Solution MethodResolution (High)Resolution (Low)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-Factor (Observed)R-WorkR-FreeMean Isotropic B
X-RAY DIFFRACTION1.9574171098.90.19727
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
RMS Deviations
KeyRefinement Restraint Deviation
p_orthonormal_tor28.3
p_staggered_tor21
p_scbond_it4.76
p_scangle_it4.73
p_planar_tor3.8
p_mcangle_it2.72
p_mcbond_it1.78
p_chiral_restr0.291
p_multtor_nbd0.221
p_singtor_nbd0.21
RMS Deviations
KeyRefinement Restraint Deviation
p_orthonormal_tor28.3
p_staggered_tor21
p_scbond_it4.76
p_scangle_it4.73
p_planar_tor3.8
p_mcangle_it2.72
p_mcbond_it1.78
p_chiral_restr0.291
p_multtor_nbd0.221
p_singtor_nbd0.21
p_xhyhbond_nbd0.196
p_angle_d0.045
p_planar_d0.044
p_bond_d0.02
p_plane_restr0.018
p_angle_deg
p_hb_or_metal_coord
p_xyhbond_nbd
p_transverse_tor
p_special_tor
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms4306
Nucleic Acid Atoms
Solvent Atoms188
Heterogen Atoms122

Software

Software
Software NamePurpose
GPRLSArefinement
MADNESdata reduction
PROCORdata reduction
FBSCALEdata reduction