1TP9

PRX D (type II) from Populus tremula

X-RAY DIFFRACTION

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Crystallization

Crystalization Experiments
ID	Method	pH	Temperature	Details
1	VAPOR DIFFUSION, HANGING DROP	8	293	PEG4000, pH 8.0, VAPOR DIFFUSION, HANGING DROP, temperature 293K

Crystal Properties
Matthews coefficient	Solvent content
2.22	42.4

Crystal Data

Unit Cell
Length ( Å )	Angle ( ˚ )
a = 59.513	α = 90
b = 69.112	β = 93.3
c = 76.429	γ = 90

Symmetry
Space Group	P 1 21 1

Diffraction

Diffraction Experiment
ID #	Crystal ID	Scattering Type	Data Collection Temperature	Detector	Detector Type	Details	Collection Date	Monochromator	Protocol
1	1	x-ray	100	IMAGE PLATE	MARRESEARCH		2001-03-03	M	SINGLE WAVELENGTH

Radiation Source
ID #	Source	Type	Wavelength List	Synchrotron Site	Beamline
1	SYNCHROTRON	LURE BEAMLINE DW32	0.948	LURE	DW32

Data Collection

Overall
ID #	Resolution (High)	Resolution (Low)	Percent Possible (Observed)	Net I Over Average Sigma (I)	Redundancy	Number Reflections (All)	Number Reflections (Observed)	Observed Criterion Sigma (F)	Observed Criterion Sigma (I)	B (Isotropic) From Wilson Plot
1	1.62	29.88	96.14				79011	2	2

Highest Resolution Shell
ID #	Resolution (High)	Resolution (Low)	Percent Possible (All)	Percent Possible (Observed)	Mean I Over Sigma (Observed)	Redundancy	Number Unique Reflections (All)
	1.62	1.68	83.5

Refinement

Statistics
Diffraction ID	Structure Solution Method	Cross Validation method	Resolution (High)	Resolution (Low)	Cut-off Sigma (F)	Number Reflections (All)	Number Reflections (Observed)	Number Reflections (R-Free)	Percent Reflections (Observed)	R-Factor (All)	R-Factor (Observed)	R-Work	R-Free	R-Free Selection Details	Mean Isotropic B
X-RAY DIFFRACTION	MOLECULAR REPLACEMENT	THROUGHOUT	1.62	29.88	2	79011	68051	7560	96.14	0.19266	0.19266	0.18914	0.22448	RANDOM	19.466

Temperature Factor Modeling
Anisotropic B[1][1]	Anisotropic B[1][2]	Anisotropic B[1][3]	Anisotropic B[2][2]	Anisotropic B[2][3]	Anisotropic B[3][3]
-0.05		0.51	-0.5		0.6

RMS Deviations
Key	Refinement Restraint Deviation
r_dihedral_angle_1_deg	6.698
r_scangle_it	4.244
r_scbond_it	2.647
r_mcangle_it	1.819
r_angle_refined_deg	1.804
r_angle_other_deg	1.137
r_mcbond_it	1.084
r_symmetry_vdw_other	0.354
r_symmetry_vdw_refined	0.319
r_symmetry_hbond_refined	0.277
r_nbd_other	0.25
r_nbd_refined	0.232
r_xyhbond_nbd_refined	0.212
r_chiral_restr	0.116
r_nbtor_other	0.083
r_bond_other_d	0.032
r_gen_planes_other	0.03
r_bond_refined_d	0.02
r_gen_planes_refined	0.018

Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen Atoms	Number
Protein Atoms	4895
Nucleic Acid Atoms
Solvent Atoms	622
Heterogen Atoms	10

Software

Software
Software Name	Purpose
REFMAC	refinement
DENZO	data reduction
SCALEPACK	data scaling
AMoRE	phasing