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Allosteric Inhibition of Protein Tyrosine Phosphatase 1B
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, HANGING DROP 277 VAPOR DIFFUSION, HANGING DROP, temperature 277K
Crystal Properties Matthews coefficient Solvent content 3.6 65.6
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 88.394 α = 90 b = 88.394 β = 90 c = 104.615 γ = 120
Symmetry Space Group P 31 2 1
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 IMAGE PLATE RIGAKU RAXIS IV mirrors 2001-08-16 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 ROTATING ANODE RIGAKU RU300 1.54
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Sym I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.9 19.67 99.6 0.056 37724 36619
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R-Sym I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1.9 1.97 99.6 0.321
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (All) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (All) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 1.9 20 36619 35578 1931 99.42 0.20698 0.2069 0.20547 0.2031 0.2357 0.2351 RANDOM 28.128
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 0.44 0.22 0.44 -0.67
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_3_deg 15.27 r_scangle_it 4.811 r_mcangle_it 4.115 r_dihedral_angle_1_deg 3.64 r_scbond_it 3.137 r_mcbond_it 2.571 r_angle_refined_deg 1.361 r_symmetry_hbond_refined 0.643 r_nbd_refined 0.22 r_xyhbond_nbd_refined 0.179
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_3_deg 15.27 r_scangle_it 4.811 r_mcangle_it 4.115 r_dihedral_angle_1_deg 3.64 r_scbond_it 3.137 r_mcbond_it 2.571 r_angle_refined_deg 1.361 r_symmetry_hbond_refined 0.643 r_nbd_refined 0.22 r_xyhbond_nbd_refined 0.179 r_symmetry_vdw_refined 0.123 r_chiral_restr 0.097 r_bond_refined_d 0.007 r_gen_planes_refined 0.004 r_bond_other_d r_angle_other_deg r_dihedral_angle_2_deg r_dihedral_angle_4_deg r_gen_planes_other r_nbd_other r_nbtor_refined r_nbtor_other r_xyhbond_nbd_other r_metal_ion_refined r_metal_ion_other r_symmetry_vdw_other r_symmetry_hbond_other r_mcbond_other r_rigid_bond_restr r_sphericity_free r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 2305 Nucleic Acid Atoms Solvent Atoms 229 Heterogen Atoms 43
Software Software Software Name Purpose REFMAC refinement d*TREK data reduction d*TREK data scaling AMoRE phasing