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Solution structure of the Sendai virus protein X C-subdomain
NMR Experiment Experiment Type Sample Contents Solvent Ionic Strength pH Pressure Temperature (K) Spectrometer 1 3D_15N-separated_NOESY 1.2-1.5mM 15N/13C Protein X, 50mM potassium phosphate buffer, 0.5M NaCl, 10mM DTT, antiprotease cocktail 90% H2O/10% D2O 0.5M NaCl 6 ambient 298 2 3D_13C-separated_NOESY 1.2-1.5mM 15N/13C Protein X, 50mM potassium phosphate buffer, 0.5M NaCl, 10mM DTT, antiprotease cocktail 90% H2O/10% D2O 0.5M NaCl 6 ambient 298 3 3D HNCO type experiments 1mM 15N/13C Protein X, 5% C12/E6/hexanol, 50mM potassium phosphate buffer, 0.5M NaCl, 10mM DTT 90% H2O/10% D2O
NMR Spectrometer Information Spectrometer Manufacturer Model Field Strength 1 Varian INOVA 800 2 Varian INOVA 600
NMR Refinement Method Details Software simulated annealing Discover
NMR Ensemble Information Conformer Selection Criteria structures with the lowest energy Conformers Calculated Total Number 100 Conformers Submitted Total Number 20 Representative Model 1 (lowest energy)
Additional NMR Experimental Information Details Sample 2 was used to measure the three different types of residual dipolar couplings used for structure refinement.
Computation: NMR Software # Classification Version Software Name Author 1 structure solution Discover 2.98 Accelrys, Inc. 2 refinement SCULPTOR hus & blackledge