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PHOTOSYNTHETIC REACTION CENTER BLASTOCHLORIS VIRIDIS (ATCC)
Starting Model(s) Initial Refinement Model(s) Type Source Accession Code Details experimental model PDB 3PRC PDB ENTRY 3PRC (CHAINS ONLY)
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 6.8 291 ammonium sulfate, sodium phosphate, LDAO, 1,2,3-heptanetriol, pH 6.8, VAPOR DIFFUSION, SITTING DROP, temperature 291K, pH 6.80
Crystal Properties Matthews coefficient Solvent content 5.31 76.82
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 223.5 α = 90 b = 223.5 β = 90 c = 112.5 γ = 90
Symmetry Space Group P 43 21 2
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 293 CCD ADSC QUANTUM 4 CONICAL SI MIRROR (RH COATING) 2002-08-16 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON APS BEAMLINE 14-BM-C APS 14-BM-C
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2.862 48.83 97.9 0.085 7.6 7.1 64248 65.6
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 2.86 3.04 97.2 0.447 1.7 6.4
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Starting model Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT PDB ENTRY 3PRC (CHAINS ONLY) 2.86 48.83 64248 6311 97.3 0.202 0.202 0.1871 0.228 0.2072 RANDOM 48.1
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3]
RMS Deviations Key Refinement Restraint Deviation c_dihedral_angle_d 20.8 c_scangle_it 2.76 c_mcangle_it 2.07 c_scbond_it 1.9 c_angle_deg 1.5 c_mcbond_it 1.23 c_improper_angle_d 1.21 c_bond_d 0.008 c_bond_d_na c_bond_d_prot
RMS Deviations Key Refinement Restraint Deviation c_dihedral_angle_d 20.8 c_scangle_it 2.76 c_mcangle_it 2.07 c_scbond_it 1.9 c_angle_deg 1.5 c_mcbond_it 1.23 c_improper_angle_d 1.21 c_bond_d 0.008 c_bond_d_na c_bond_d_prot c_angle_d c_angle_d_na c_angle_d_prot c_angle_deg_na c_angle_deg_prot c_dihedral_angle_d_na c_dihedral_angle_d_prot c_improper_angle_d_na c_improper_angle_d_prot
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 9346 Nucleic Acid Atoms Solvent Atoms Heterogen Atoms 794
Software Software Software Name Purpose DENZO data reduction SCALEPACK data scaling CNS refinement MOSFLM data reduction CCP4 data scaling CNS phasing