1QWV

Solution structure of Antheraea polyphemus pheromone binding protein (ApolPBP)


SOLUTION NMR
NMR Experiment
ExperimentTypeSample ContentsSolventIonic StrengthpHPressureTemperature (K)Spectrometer
13D_15N-separated_NOESY1mM ApolPBP U-15N,13C; 50mM phosphate buffer; 1mM EDTA; 0.1% NaN3; 95% H2O; 5% D2O95% H2O/5% D2O50mM phosphate6.33ambient308
23D_13C-separated_NOESY1mM ApolPBP U-15N,13C; 50mM phosphate buffer; 1mM EDTA; 0.1% NaN3; 95% H2O; 5% D2O95% H2O/5% D2O50mM phosphate6.33ambient308
NMR Spectrometer Information
SpectrometerManufacturerModelField Strength
1BrukerDRX800
2BrukerDMX600
3BrukerDMX500
NMR Refinement
MethodDetailsSoftware
torsion angle dynamics simulated annealing, thin layer water refinement2501 NOE-derived distance constraints, 243 dihedral angle restraints, 120 distance restraints from hydrogen bondsNMRPipe
NMR Ensemble Information
Conformer Selection Criteriastructures with the lowest energy
Conformers Calculated Total Number200
Conformers Submitted Total Number20
Representative Model3 (closest to the average)
Additional NMR Experimental Information
Detailsmixing time 110ms for 13C separated NOESY, 120ms for 15N separated NOESY
Computation: NMR Software
#ClassificationVersionSoftware NameAuthor
1processingNMRPipe2.1Delaglio F., Grzesiek S., Vuister G.W., Zhu G., Pfizer J., Bax A.
2data analysisNMRView5.0.4Johnson B.A., Blevins R.A.
3structure solutionCYANA1.0.6Guntert P., Mumenthaler C., Wuthrich K.
4refinementARIA1.2Linge J.P., Habeck M., Rieping W., Nilges M.