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UDP-MAGNESIUM COMPLEX OF SPSA FROM BACILLUS SUBTILIS
Starting Model(s) Initial Refinement Model(s) Type Source Accession Code Details experimental model PDB 1QG8
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 8 pH 8.0
Crystal Properties Matthews coefficient Solvent content 2.04 39
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 47.42 α = 90 b = 141.997 β = 90 c = 81.439 γ = 90
Symmetry Space Group C 2 2 21
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 IMAGE PLATE MARRESEARCH 1998-09-01 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON SRS BEAMLINE PX7.2 SRS PX7.2
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) R Sym I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2 20 96 0.058 0.058 18.3 3.7 18368
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) R-Sym I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 2 2.07 90 0.32 0.32 3.6 3.5
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Starting model Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 1QG8 2 20 18262 916 96 0.19 0.1874 0.24 RANDOM
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3]
RMS Deviations Key Refinement Restraint Deviation p_transverse_tor 26.7 p_staggered_tor 14.6 p_planar_tor 4 p_scangle_it 3.1 p_mcangle_it 2.5 p_scbond_it 1.9 p_mcbond_it 1.65 p_multtor_nbd 0.25 p_singtor_nbd 0.184 p_chiral_restr 0.125
RMS Deviations Key Refinement Restraint Deviation p_transverse_tor 26.7 p_staggered_tor 14.6 p_planar_tor 4 p_scangle_it 3.1 p_mcangle_it 2.5 p_scbond_it 1.9 p_mcbond_it 1.65 p_multtor_nbd 0.25 p_singtor_nbd 0.184 p_chiral_restr 0.125 p_angle_d 0.032 p_planar_d 0.032 p_bond_d 0.011 p_plane_restr 0.01 p_angle_deg p_hb_or_metal_coord p_xhyhbond_nbd p_xyhbond_nbd p_orthonormal_tor p_special_tor
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 1968 Nucleic Acid Atoms Solvent Atoms 191 Heterogen Atoms 33
Software Software Software Name Purpose DENZO data reduction SCALEPACK data scaling REFMAC refinement