Solution structure of the DNA-binding domain of the Erwinia amylovora RcsB protein
SOLUTION NMR
| NMR Experiment | ||||||||
|---|---|---|---|---|---|---|---|---|
| Experiment | Type | Sample Contents | Solvent | Ionic Strength | pH | Pressure | Temperature (K) | Spectrometer |
| 1 | 3D_13C-separated_NOESY | 1 mM C-terminal fragment of RcsB in 50 mM phosphate buffer, pH 6.4 | 90% H2O/10% D2O | 6.4 | ambient | 289 | ||
| 2 | 3D_15N-separated_NOESY | 1 mM C-terminal fragment of RcsB in 50 mM phosphate buffer, pH 6.4 | 90% H2O/10% D2O | 6.4 | ambient | 289 | ||
| 3 | 2D NOESY in D2O | 1 mM C-terminal fragment of RcsB in 50 mM phosphate buffer, pH 6.4 | D2O | 6.4 | ambient | 289 | ||
| NMR Spectrometer Information | |||
|---|---|---|---|
| Spectrometer | Manufacturer | Model | Field Strength |
| 1 | Bruker | DMX | 600 |
| 2 | Bruker | DMX | 500 |
| 3 | Bruker | DRX | 800 |
| NMR Refinement | ||
|---|---|---|
| Method | Details | Software |
| torsion angle dynamics | the structures are based on 1618 meaningful NOE distance restraints | XwinNMR |
| NMR Ensemble Information | |
|---|---|
| Conformer Selection Criteria | The submitted conformer models are those with the fewest number of constraint violations |
| Conformers Calculated Total Number | 100 |
| Conformers Submitted Total Number | 20 |
| Representative Model | 1 (fewest violations) |
| Additional NMR Experimental Information | |
|---|---|
| Details | The structure was determined using triple-resonance NMR spectroscopy. |
| Computation: NMR Software | ||||
|---|---|---|---|---|
| # | Classification | Version | Software Name | Author |
| 1 | processing | XwinNMR | 2.6 | Bruker |
| 2 | data analysis | Felix | 97 | Accelrys Inc |
| 3 | refinement | nmr2st | 1.05 | Pristovsek, P. |
| 4 | structure solution | DYANA | 1.5 | Guentert, P. |














