X-RAY DIFFRACTION

Crystallization

Crystalization Experiments
IDMethodpHTemperatureDetails
1VAPOR DIFFUSION, HANGING DROP629320-30% PEG 4K, 0.2 imidazole/malate, pH 6.0, VAPOR DIFFUSION, HANGING DROP, temperature 293K
Crystal Properties
Matthews coefficientSolvent content
1.6926.44

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 30.562α = 104.99
b = 51.792β = 94.36
c = 79.78γ = 94.85
Symmetry
Space GroupP 1

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-ray100CCDMARRESEARCH2000-10-07MSINGLE WAVELENGTH
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1SYNCHROTRONESRF BEAMLINE ID14-30.931ESRFID14-3

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)R Sym I (Observed)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
11.3725940.02219.11.89254714.7

Refinement

Statistics
Diffraction IDStructure Solution MethodCross Validation methodResolution (High)Resolution (Low)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-Factor (Observed)R-WorkR-FreeR-Free Selection DetailsMean Isotropic B
X-RAY DIFFRACTIONMOLECULAR REPLACEMENTTHROUGHOUT1.372590689184393.970.15310.152560.1797RANDOM10.992
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
1.710.49-0.12-0.950.03-0.68
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_1_deg6.844
r_scangle_it3.117
r_scbond_it2.071
r_mcangle_it1.549
r_angle_refined_deg1.398
r_mcbond_it0.863
r_angle_other_deg0.801
r_symmetry_vdw_other0.324
r_symmetry_vdw_refined0.271
r_nbd_other0.264
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_1_deg6.844
r_scangle_it3.117
r_scbond_it2.071
r_mcangle_it1.549
r_angle_refined_deg1.398
r_mcbond_it0.863
r_angle_other_deg0.801
r_symmetry_vdw_other0.324
r_symmetry_vdw_refined0.271
r_nbd_other0.264
r_symmetry_hbond_refined0.186
r_nbd_refined0.178
r_xyhbond_nbd_refined0.168
r_nbtor_other0.089
r_chiral_restr0.083
r_bond_refined_d0.011
r_gen_planes_refined0.007
r_gen_planes_other0.004
r_bond_other_d0.002
r_dihedral_angle_2_deg
r_xyhbond_nbd_other
r_symmetry_hbond_other
r_rigid_bond_restr
r_sphericity_free
r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms4437
Nucleic Acid Atoms
Solvent Atoms589
Heterogen Atoms74

Software

Software
Software NamePurpose
REFMACrefinement
DENZOdata reduction
CCP4data scaling
AMoREphasing