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QUINATE/SHIKIMATE DEHYDROGENASE YDIB COMPLEXED WITH NADH
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 7.5 KH2PO4, NAH2PO4, HEPES, pH 7.50
Crystal Properties Matthews coefficient Solvent content 2.305 45
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 157.874 α = 90 b = 157.874 β = 90 c = 40.011 γ = 120
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD ADSC CCD 2001-08-11 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON NSLS BEAMLINE X8C NSLS X8C
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2.5 20 99.7 25.5 3.88 38407 31.2
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 2.5 2.59 100 7.2
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MAD THROUGHOUT 2.5 19.8 20116 972 99.9 0.226 0.226 0.2188 0.294 0.291 RANDOM 49.1
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -1.85 4.1 -1.85 3.7
RMS Deviations Key Refinement Restraint Deviation c_dihedral_angle_d 24.7 c_angle_deg 1.6 c_improper_angle_d 0.92 c_bond_d 0.011 c_bond_d_na c_bond_d_prot c_angle_d c_angle_d_na c_angle_d_prot c_angle_deg_na
RMS Deviations Key Refinement Restraint Deviation c_dihedral_angle_d 24.7 c_angle_deg 1.6 c_improper_angle_d 0.92 c_bond_d 0.011 c_bond_d_na c_bond_d_prot c_angle_d c_angle_d_na c_angle_d_prot c_angle_deg_na c_angle_deg_prot c_dihedral_angle_d_na c_dihedral_angle_d_prot c_improper_angle_d_na c_improper_angle_d_prot c_mcbond_it c_mcangle_it c_scbond_it c_scangle_it
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 4274 Nucleic Acid Atoms Solvent Atoms 154 Heterogen Atoms 113
Software Software Software Name Purpose CNS refinement DENZO data reduction SCALEPACK data scaling CNS phasing