1MXP
Solution structure of the ribbon disulfide bond isomer of alpha-conotoxin AuIB
SOLUTION NMR
NMR Experiment | ||||||||
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Experiment | Type | Sample Contents | Solvent | Ionic Strength | pH | Pressure | Temperature (K) | Spectrometer |
1 | 2D NOESY | 2mM ribbon AuIB peptide | 90% H2O/10% D2O | 3.5 | atmospheric atm | 280 | ||
2 | 2D TOCSY | 2mM ribbon AuIB peptide | 90% H2O/10% D2O | 3.5 | atmospheric atm | 280 | ||
3 | DQF-COSY | 2mM ribbon AuIB peptide | 90% H2O/10% D2O | 3.5 | atmospheric atm | 280 | ||
4 | E-COSY | 2mM ribbon AuIB peptide | 100% D2O | 3.5 | atmospheric atm | 280 | ||
5 | 2D NOESY | 2mM ribbon AuIB peptide | 100% D2O | 3.5 | atmospheric atm | 280 | ||
6 | 2D TOCSY | 2mM ribbon AuIB peptide | 100% D2O | 3.5 | atmospheric atm | 280 |
NMR Spectrometer Information | |||
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Spectrometer | Manufacturer | Model | Field Strength |
1 | Bruker | DMX | 750 |
2 | Bruker | ARX | 500 |
NMR Refinement | ||
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Method | Details | Software |
simulated annealing, molecular dynamics, energy minimisation in a CHARM force field | 140 noe restraints were used including 4 long and 13 medium range noes, also 3 dihedral angles were included | XwinNMR |
NMR Ensemble Information | |
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Conformer Selection Criteria | structures with the least restraint violations,structures with the lowest energy |
Conformers Calculated Total Number | 50 |
Conformers Submitted Total Number | 20 |
Representative Model | 7 (closest to the average) |
Computation: NMR Software | ||||
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# | Classification | Version | Software Name | Author |
1 | collection | XwinNMR | 2.6 | Bruker |
2 | processing | XwinNMR | 2.6 | Bruker |
3 | refinement | X-PLOR | 3.851 then 3.1f | Brunger |
4 | structure solution | X-PLOR | 3.851 then 3.1f | Brunger |