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PEPCK complex with a GTP-competitive inhibitor
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION VAPOR DIFFUSION
Crystal Properties Matthews coefficient Solvent content 2.21 44.34
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 45.407 α = 88.91 b = 61.067 β = 70.21 c = 62.007 γ = 72.62
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 110 IMAGE PLATE MARRESEARCH 1998-09-29 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 ROTATING ANODE RIGAKU 1.5418
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Sym I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2.25 30 94.1 0.044 29.6 1.9 26567
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R-Sym I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 2.25 2.33 88.2 0.06 1.7
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Free (Depositor) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION rigid-body refinement THROUGHOUT 2.25 50 25224 1331 94.04 0.18087 0.17794 0.23665 RANDOM 17.051
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -0.6 0.37 -0.03 0.43 -0.53 -0.01
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_1_deg 6.17 r_scangle_it 3.007 r_scbond_it 1.825 r_angle_refined_deg 1.237 r_mcangle_it 1.13 r_mcbond_it 0.585 r_symmetry_vdw_refined 0.198 r_nbd_refined 0.196 r_symmetry_hbond_refined 0.188 r_xyhbond_nbd_refined 0.133
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_1_deg 6.17 r_scangle_it 3.007 r_scbond_it 1.825 r_angle_refined_deg 1.237 r_mcangle_it 1.13 r_mcbond_it 0.585 r_symmetry_vdw_refined 0.198 r_nbd_refined 0.196 r_symmetry_hbond_refined 0.188 r_xyhbond_nbd_refined 0.133 r_chiral_restr 0.081 r_bond_refined_d 0.012 r_gen_planes_refined 0.005
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 4720 Nucleic Acid Atoms Solvent Atoms 183 Heterogen Atoms 42
Software Software Software Name Purpose SCALEPACK data scaling REFMAC refinement