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Biosynthetic thiolase, Cys89 acetylated, unliganded form
Starting Model(s) Initial Refinement Model(s) Type Source Accession Code Details experimental model PDB 1DLU
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, SITTING DROP 5 293 lithium sulphate, ammonium sulphate, pH 5.0, VAPOR DIFFUSION, SITTING DROP at 293K
Crystal Properties Matthews coefficient Solvent content 3.06 59.76
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 84.404 α = 90 b = 79.275 β = 92.21 c = 148.479 γ = 90
Symmetry Space Group P 1 21 1
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD MARRESEARCH 2001-09-22 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON MAX II BEAMLINE I711 1.09785 MAX II I711
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Sym I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.87 50 97.9 0.092 9.5 3.3 158418 158418 -3 24
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R-Sym I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 1.87 1.95 90.1 0.354 3.2 2.6 17066
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Starting model Resolution (High) Resolution (Low) Cut-off Sigma (I) Number Reflections (All) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (All) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 1DLU 1.87 20 -3 158300 158300 7187 97.97 0.2078 0.2078 0.20591 0.218 0.24725 0.2557 COPIED FROM 1DLU, MISSING RESOLUTION RANGE COMPLETED RANDOMLY 12.727
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 0.08 -0.86 -0.68 0.53
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_1_deg 6.436 r_scangle_it 4.108 r_scbond_it 2.983 r_mcangle_it 2.94 r_mcbond_it 2.277 r_angle_refined_deg 1.51 r_angle_other_deg 0.885 r_symmetry_vdw_other 0.296 r_nbd_other 0.246 r_symmetry_hbond_refined 0.237
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_1_deg 6.436 r_scangle_it 4.108 r_scbond_it 2.983 r_mcangle_it 2.94 r_mcbond_it 2.277 r_angle_refined_deg 1.51 r_angle_other_deg 0.885 r_symmetry_vdw_other 0.296 r_nbd_other 0.246 r_symmetry_hbond_refined 0.237 r_nbd_refined 0.215 r_xyhbond_nbd_refined 0.208 r_symmetry_vdw_refined 0.178 r_chiral_restr 0.096 r_nbtor_other 0.087 r_bond_refined_d 0.016 r_gen_planes_refined 0.006 r_bond_other_d 0.003 r_gen_planes_other 0.002 r_dihedral_angle_2_deg r_xyhbond_nbd_other r_symmetry_hbond_other r_rigid_bond_restr r_sphericity_free r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 11344 Nucleic Acid Atoms Solvent Atoms 1094 Heterogen Atoms 44
Software Software Software Name Purpose XDS data scaling XDS data reduction REFMAC refinement