☰ Navigation Tabs
CRYSTAL STRUCTURE OF E. COLI ACONITASE B.
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, HANGING DROP 7.1 290 ammonium sulphate, HEPES, cobalt chloride, pH 7.1, VAPOR DIFFUSION, HANGING DROP, temperature 290K
Crystal Properties Matthews coefficient Solvent content 3.57 65.52
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 138.97 α = 90 b = 169.63 β = 90 c = 113.38 γ = 90
Symmetry Space Group P 21 21 2
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 293 IMAGE PLATE MARRESEARCH 1996-08-28 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON SRS BEAMLINE PX9.5 0.900 SRS PX9.5
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2.4 20 96.02 0.073 13 3.04 100790 100790 -3 29.7
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 2.4 2.44 93.6 0.449 2.23
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (All) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MIR THROUGHOUT 2.4 20 100790 100790 5019 96.02 0.15375 0.15115 0.1549 0.20278 0.2018 RANDOM 37.576
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 0.72 0.03 -0.75
RMS Deviations Key Refinement Restraint Deviation r_scbond_it 19.008 r_scangle_it 18.713 r_dihedral_angle_3_deg 16.149 r_mcangle_it 13.099 r_mcbond_it 12.374 r_dihedral_angle_1_deg 3.203 r_angle_refined_deg 1.177 r_symmetry_hbond_refined 0.281 r_symmetry_vdw_refined 0.244 r_nbd_refined 0.236
RMS Deviations Key Refinement Restraint Deviation r_scbond_it 19.008 r_scangle_it 18.713 r_dihedral_angle_3_deg 16.149 r_mcangle_it 13.099 r_mcbond_it 12.374 r_dihedral_angle_1_deg 3.203 r_angle_refined_deg 1.177 r_symmetry_hbond_refined 0.281 r_symmetry_vdw_refined 0.244 r_nbd_refined 0.236 r_xyhbond_nbd_refined 0.148 r_chiral_restr 0.087 r_bond_refined_d 0.007 r_gen_planes_refined 0.003 r_bond_other_d r_angle_other_deg r_gen_planes_other r_nbd_other r_nbtor_other r_xyhbond_nbd_other r_symmetry_vdw_other r_symmetry_hbond_other r_rigid_bond_restr r_sphericity_free r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 13104 Nucleic Acid Atoms Solvent Atoms 580 Heterogen Atoms 38
Software Software Software Name Purpose MLPHARE phasing REFMAC refinement DENZO data reduction SCALEPACK data scaling