X-RAY DIFFRACTION

Crystallization

Crystalization Experiments
IDMethodpHTemperatureDetails
1VAPOR DIFFUSION, HANGING DROP7.429122% Ammonium sulphate, pH 7.4, VAPOR DIFFUSION, HANGING DROP, temperature 291K
Crystal Properties
Matthews coefficientSolvent content
3.5365.21

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 147.243α = 90
b = 207.204β = 90
c = 213.22γ = 90
Symmetry
Space GroupP 21 21 21

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-ray100IMAGE PLATEMARRESEARCH1999-09-30MSINGLE WAVELENGTH
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1SYNCHROTRONEMBL/DESY, HAMBURG BEAMLINE BW7B0.84410EMBL/DESY, HAMBURGBW7B

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)R Merge I (Observed)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
12.43099.90.0778.1254279254279
Highest Resolution Shell
ID #Resolution (High)Resolution (Low)Percent Possible (All)Percent Possible (Observed)Mean I Over Sigma (Observed)RedundancyNumber Unique Reflections (All)
2.42.44100

Refinement

Statistics
Diffraction IDStructure Solution MethodCross Validation methodResolution (High)Resolution (Low)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-Factor (Observed)R-WorkR-FreeR-Free Selection DetailsMean Isotropic B
X-RAY DIFFRACTIONMOLECULAR REPLACEMENTTHROUGHOUT2.4152394221267699.890.190770.188980.22444RANDOM34.634
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
2.71-1.59-1.12
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg35.397
r_dihedral_angle_4_deg15.772
r_dihedral_angle_3_deg15.71
r_dihedral_angle_1_deg6.188
r_scangle_it2.727
r_scbond_it1.77
r_angle_refined_deg1.333
r_mcangle_it1.149
r_mcbond_it0.593
r_nbd_refined0.21
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg35.397
r_dihedral_angle_4_deg15.772
r_dihedral_angle_3_deg15.71
r_dihedral_angle_1_deg6.188
r_scangle_it2.727
r_scbond_it1.77
r_angle_refined_deg1.333
r_mcangle_it1.149
r_mcbond_it0.593
r_nbd_refined0.21
r_symmetry_hbond_refined0.157
r_symmetry_vdw_refined0.145
r_xyhbond_nbd_refined0.135
r_chiral_restr0.103
r_bond_refined_d0.012
r_gen_planes_refined0.005
r_bond_other_d
r_angle_other_deg
r_gen_planes_other
r_nbd_other
r_nbtor_other
r_xyhbond_nbd_other
r_symmetry_vdw_other
r_symmetry_hbond_other
r_rigid_bond_restr
r_sphericity_free
r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms30730
Nucleic Acid Atoms
Solvent Atoms1595
Heterogen Atoms132

Software

Software
Software NamePurpose
AMoREphasing
REFMACrefinement
DENZOdata reduction
SCALEPACKdata scaling