☰ Navigation Tabs
Solution Structure of the first HMG box in human Upstream binding factor
NMR Experiment Experiment Type Sample Contents Solvent Ionic Strength pH Pressure Temperature (K) Spectrometer 1 3D_13C-separated_NOESY 3mM hUBF HMG box1 U-15N,13C;
10mM NaPO4 buffer pH5.5;
90% H2O, 10%D2O 90% H2O/10% D2O 10mM 5.5 ambient 300 2 3D_15N-separated_NOESY 3mM hUBF HMG box1 U-15N,13C;
10mM NaPO4 buffer pH5.5;
90% H2O, 10%D2O 90% H2O/10% D2O 10mM 5.5 ambient 300 3 2D NOESY 3mM hUBF HMG box1 U-15N;
10mM NaPO4 buffer pH5.5;
100% D2O 100% D2O 10mM 5.5 ambient 300
NMR Spectrometer Information Spectrometer Manufacturer Model Field Strength 1 Bruker DMX 500
NMR Refinement Method Details Software simulated annealing;
torsion angle dynamics CNS
NMR Ensemble Information Conformer Selection Criteria structures with the least restraint violations, structures with the lowest energy Conformers Calculated Total Number 60 Conformers Submitted Total Number 20 Representative Model 1 (lowest energy)
Computation: NMR Software # Classification Version Software Name Author 1 refinement CNS 1.0 Brunger, A.T. 2 collection XwinNMR 1.3 Bruker 3 processing NMRPipe Delaglio, F. et al. 4 data analysis PIPP Garrett, D. et al.