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STRUCTURAL CHARACTERIZATION OF THE COMPLEX OF THE REV RESPONSE ELEMENT RNA WITH A SELECTED PEPTIDE
NMR Experiment Experiment Type Sample Contents Solvent Ionic Strength pH Pressure Temperature (K) Spectrometer 1 2D NOESY 1.6 mM RNA/peptide 90% H2O/10% D2O, 20 mM sodium phosphate, 100 mM sodium chloride, 0.1 mM EDTA, pH 6.5 20mM sodium phosphate, 100 mM sodium chloride 6.5 1 atm 298 2 3D_13C-separated_NOESY 1.6 mM RNA/peptide 90% H2O/10% D2O, 20 mM sodium phosphate, 100 mM sodium chloride, 0.1 mM EDTA, pH 6.5 20mM sodium phosphate, 100 mM sodium chloride 6.5 1 atm 298 3 3D_15N-separated_NOESY 1.6 mM RNA/peptide 90% H2O/10% D2O, 20 mM sodium phosphate, 100 mM sodium chloride, 0.1 mM EDTA, pH 6.5 20mM sodium phosphate, 100 mM sodium chloride 6.5 1 atm 298 4 DQF-COSY 1.6 mM RNA/peptide 90% H2O/10% D2O, 20 mM sodium phosphate, 100 mM sodium chloride, 0.1 mM EDTA, pH 6.5 20mM sodium phosphate, 100 mM sodium chloride 6.5 1 atm 298 5 HNCA-J 1.6 mM RNA/peptide 90% H2O/10% D2O, 20 mM sodium phosphate, 100 mM sodium chloride, 0.1 mM EDTA, pH 6.5 20mM sodium phosphate, 100 mM sodium chloride 6.5 1 atm 298
NMR Spectrometer Information Spectrometer Manufacturer Model Field Strength 1 500 2 600
NMR Ensemble Information Conformer Selection Criteria Conformers Calculated Total Number 20 Conformers Submitted Total Number 7 Representative Model (fewest violations, lowest energy)
Computation: NMR Software # Classification Version Software Name Author 1 data analysis XEASY 2 data analysis Felix