SOLUTION STRUCTURE OF THE EEA1 FYVE DOMAIN COMPLEXED WITH INOSITOL 1,3-BISPHOSPHATE
SOLUTION NMR
| NMR Experiment | ||||||||
|---|---|---|---|---|---|---|---|---|
| Experiment | Type | Sample Contents | Solvent | Ionic Strength | pH | Pressure | Temperature (K) | Spectrometer |
| 1 | 2D NOESY | 1mM FYVE domain; 20 mM d-Tris buffer; pH 6.7; 200 mM KCl; 20 mM d-DTT; 1 mM NaN3 | 90% H2O/10% D2O | 200 mM KCl | 6.7 | 1 atm | 298 | |
| 2 | 2D NOESY | 1mM FYVE domain; 20 mM d-Tris buffer; pH 6.7; 200 mM KCl; 20 mM d-DTT; 1 mM NaN3 | 99.99% D2O | 200 mM KCl | 6.7 | 1 atm | 298 | |
| 3 | 3D_15N-separated_NOESY | 1mM FYVE domain; 20 mM d-Tris buffer; pH 6.7; 200 mM KCl; 20 mM d-DTT; 1 mM NaN3 | 90% H2O/10% D2O | 200 mM KCl | 6.7 | 1 atm | 298 | |
| 4 | 3D_13C-separated_NOESY | 1mM FYVE domain; 20 mM d-Tris buffer; pH 6.7; 200 mM KCl; 20 mM d-DTT; 1 mM NaN3 | 99.99% D2O | 200 mM KCl | 6.7 | 1 atm | 298 | |
| 5 | 4D_13C-separated_NOESY | 1mM FYVE domain; 20 mM d-Tris buffer; pH 6.7; 200 mM KCl; 20 mM d-DTT; 1 mM NaN3 | 99.99% D2O | 200 mM KCl | 6.7 | 1 atm | 298 | |
| 6 | HNHA | 1mM FYVE domain; 20 mM d-Tris buffer; pH 6.7; 200 mM KCl; 20 mM d-DTT; 1 mM NaN3 | 90% H2O/10% D2O | 200 mM KCl | 6.7 | 1 atm | 298 | |
| NMR Spectrometer Information | |||
|---|---|---|---|
| Spectrometer | Manufacturer | Model | Field Strength |
| 1 | Varian | INOVA | 600 |
| 2 | Varian | INOVA | 500 |
| NMR Refinement | ||
|---|---|---|
| Method | Details | Software |
| simulated annealing | NMRPipe | |
| NMR Ensemble Information | |
|---|---|
| Conformer Selection Criteria | structures with the lowest energy |
| Conformers Calculated Total Number | 198 |
| Conformers Submitted Total Number | 20 |
| Representative Model | 1 (closest to the average) |
| Computation: NMR Software | ||||
|---|---|---|---|---|
| # | Classification | Version | Software Name | Author |
| 1 | processing | NMRPipe | 1 | Delaglio |
| 2 | structure solution | X-PLOR | 3.84 | Brunger |
| 3 | refinement | X-PLOR | 3.84 | Brunger |














