NMR structure of cysteinyl-phosphorylated enzyme IIB of the N,N'-diacetylchitobiose specific phosphoenolpyruvate-dependent phosphotransferase system of Escherichia coli.
SOLUTION NMR
| NMR Experiment | ||||||||
|---|---|---|---|---|---|---|---|---|
| Experiment | Type | Sample Contents | Solvent | Ionic Strength | pH | Pressure | Temperature (K) | Spectrometer |
| 1 | NOESY | 7 | 1 atm | 295 | ||||
| NMR Spectrometer Information | |||
|---|---|---|---|
| Spectrometer | Manufacturer | Model | Field Strength |
| 1 | Varian | INOVA | 600 |
| NMR Refinement | ||
|---|---|---|
| Method | Details | Software |
| DISTANCE GEOMETRY, RESTRAINED MOLECULAR DYNAMICS, SIMULATED ANNEALING | REFINEMENT DETAILS CAN BE FOUND IN THE JRNL CITATION ABOVE | GROMACS |
| NMR Ensemble Information | |
|---|---|
| Conformer Selection Criteria | TARGET-FUNCTION, R-FACTOR, NUMBER OF VIOLATIONS |
| Conformers Calculated Total Number | 33 |
| Conformers Submitted Total Number | 9 |
| Representative Model | 1 (n/a) |
| Computation: NMR Software | ||||
|---|---|---|---|---|
| # | Classification | Version | Software Name | Author |
| 1 | refinement | GROMACS | VAN DER SPOEL | |
| 2 | structure solution | SNARF | ||
| 3 | structure solution | DDD | ||
| 4 | structure solution | GROMACS | ||
