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Quercetin 2,3-dioxygenase in complex with the inhibitor diethyldithiocarbamate
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, HANGING DROP 5.2 HANGING DROP, 21-23% PEG 8000, 200 MM AMMONIUM SULFATE, 100 MM CITRATE BUFFER, PH 5.2, 10 MM NA DIETHYLDITHIOCARBAMATE
Crystal Properties Matthews coefficient Solvent content 2.32 46.5
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 108.939 α = 90 b = 55.646 β = 98.26 c = 123.863 γ = 90
Symmetry Space Group P 1 21 1
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 IMAGE PLATE MARRESEARCH MIRRORS 1999-04-15 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON EMBL/DESY, HAMBURG BEAMLINE BW7B EMBL/DESY, HAMBURG BW7B
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.7 19.92 91.3 0.062 18.1 4.3 148198
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 1.7 1.74 69.4 0.173 4.5 2.5
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION OTHER THROUGHOUT 1.7 19.92 140366 7426 91.3 0.162 0.161 0.1982 0.183 0.2116 RANDOM
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3]
RMS Deviations Key Refinement Restraint Deviation r_scangle_it 2.799 r_scbond_it 1.729 r_angle_other_deg 1.305 r_mcangle_it 0.942 r_mcbond_it 0.521 r_nbd_refined 0.217 r_symmetry_vdw_refined 0.184 r_symmetry_hbond_refined 0.166 r_xyhbond_nbd_refined 0.129 r_chiral_restr 0.089
RMS Deviations Key Refinement Restraint Deviation r_scangle_it 2.799 r_scbond_it 1.729 r_angle_other_deg 1.305 r_mcangle_it 0.942 r_mcbond_it 0.521 r_nbd_refined 0.217 r_symmetry_vdw_refined 0.184 r_symmetry_hbond_refined 0.166 r_xyhbond_nbd_refined 0.129 r_chiral_restr 0.089 r_bond_refined_d 0.009 r_gen_planes_refined 0.005 r_bond_other_d r_angle_refined_deg r_dihedral_angle_1_deg r_dihedral_angle_2_deg r_dihedral_angle_3_deg r_dihedral_angle_4_deg r_gen_planes_other r_nbd_other r_nbtor_refined r_nbtor_other r_xyhbond_nbd_other r_metal_ion_refined r_metal_ion_other r_symmetry_vdw_other r_symmetry_hbond_other r_symmetry_metal_ion_refined r_symmetry_metal_ion_other r_mcbond_other r_mcangle_other r_scbond_other r_scangle_other r_long_range_B_refined r_long_range_B_other r_rigid_bond_restr r_sphericity_free r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 10321 Nucleic Acid Atoms Solvent Atoms 1444 Heterogen Atoms 324
Software Software Software Name Purpose REFMAC refinement DENZO data reduction SCALEPACK data scaling