1G4G

NMR STRUCTURE OF THE FIFTH DOMAIN OF HUMAN BETA2-GLYCOPROTEIN I


SOLUTION NMR
NMR Experiment
ExperimentTypeSample ContentsSolventIonic StrengthpHPressureTemperature (K)Spectrometer
13D_15N-separated_NOESY1mM beta2-glycoprotein I domain V U-15N; 20mM Na-phosphate buffer, pH 6.0; 90% H2O, 10% D2O90% H2O/10% D2O0.126.0ambient298
23D_13C-separated_NOESY1mM beta2-glycoprotein I domain V U-15N,13C; 20mM Na-phosphate buffer, pD 6.0; 100% D2O100% D2O0.126.0ambient298
3HNCO-TROSY1mM beta2-glycoprotein I domain V U-15N; 20mM Na-phosphate buffer, pH 6.0; 90% H2O, 10% D2O90% H2O/10% D2O0.126.0ambient298
4HMQC-J1mM beta2-glycoprotein I domain V U-15N; 20mM Na-phosphate buffer, pH 6.0; 90% H2O, 10% D2O90% H2O/10% D2O0.126.0ambient298
5HNHB1mM beta2-glycoprotein I domain V U-15N; 20mM Na-phosphate buffer, pH 6.0; 90% H2O, 10% D2O90% H2O/10% D2O0.126.0ambient298
6HN(CO)HB1mM beta2-glycoprotein I domain V U-15N; 20mM Na-phosphate buffer, pH 6.0; 90% H2O, 10% D2O90% H2O/10% D2O0.126.0ambient298
7N15-TOCSY1mM beta2-glycoprotein I domain V U-15N; 20mM Na-phosphate buffer, pH 6.0; 90% H2O, 10% D2O90% H2O/10% D2O0.126.0ambient298
NMR Spectrometer Information
SpectrometerManufacturerModelField Strength
1BrukerDRX600
2BrukerDMX800
NMR Refinement
MethodDetailsSoftware
simulated annealingthe structures are based on a total of 1402 restraints, 1288 are NOE-derived distance constraints, 88 dihedral angle restraints, 26 distance restraints from hydrogen bondsX-PLOR
NMR Ensemble Information
Conformer Selection Criteria
Conformers Calculated Total Number
Conformers Submitted Total Number1
Representative Model (minimized average structure)
Computation: NMR Software
#ClassificationVersionSoftware NameAuthor
1structure solutionX-PLOR3.841Brunger
2refinementX-PLOR3.841Brunger