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CRYSTAL STRUCTURE OF THE HEXA-SUBSTITUTED MUTANT OF THE MOLECULAR CHAPERONIN GROEL APICAL DOMAIN
Starting Model(s) Initial Refinement Model(s) Type Source Accession Code Details experimental model PDB 1KID GROEL(191-376) (PDB: 1KID)
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, HANGING DROP 6.5 290 0.75-0.9 M SODIUM POTASSIUM TARTRATE, 50 MM MES SODIUM, pH 6.50, VAPOR DIFFUSION, HANGING DROP, temperature 290K
Crystal Properties Matthews coefficient Solvent content 2.7 43
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 75.93 α = 90 b = 83.94 β = 90 c = 35.3 γ = 90
Symmetry Space Group P 21 21 2
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 IMAGE PLATE MARRESEARCH 1998-11-08 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON LURE BEAMLINE DW32 LURE DW32
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2.2 38.1 93 0.143 5.4 3.8 10968 10757 3 14.1
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 2.22 2.34 89.2 0.398 2.4 1.9
Refinement Statistics Diffraction ID Structure Solution Method Starting model Resolution (High) Resolution (Low) Number Reflections (All) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MR GROEL(191-376) (PDB: 1KID) 2.2 38.1 10968 10757 558 93 0.237 0.219 0.2238 0.279 0.2695 RANDOM 19.4
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3]
RMS Deviations Key Refinement Restraint Deviation p_transverse_tor 27.1 p_staggered_tor 15.5 p_scangle_it 3.958 p_scbond_it 2.919 p_planar_tor 2.1 p_mcangle_it 1.651 p_angle_deg 1.5 p_mcbond_it 1.029 p_multtor_nbd 0.238 p_singtor_nbd 0.179
RMS Deviations Key Refinement Restraint Deviation p_transverse_tor 27.1 p_staggered_tor 15.5 p_scangle_it 3.958 p_scbond_it 2.919 p_planar_tor 2.1 p_mcangle_it 1.651 p_angle_deg 1.5 p_mcbond_it 1.029 p_multtor_nbd 0.238 p_singtor_nbd 0.179 p_xyhbond_nbd 0.179 p_chiral_restr 0.077 p_angle_d 0.022 p_planar_d 0.018 p_plane_restr 0.0151 p_bond_d 0.005 p_hb_or_metal_coord p_xhyhbond_nbd p_orthonormal_tor p_special_tor
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 1412 Nucleic Acid Atoms Solvent Atoms 149 Heterogen Atoms 6
Software Software Software Name Purpose AMoRE phasing REFMAC refinement MOSFLM data reduction CCP4 data scaling