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DIMERIC SOLUTION STRUCTURE OF THE CYCLIC OCTAMER CD(TGCTCGCT)
NMR Experiment Experiment Type Sample Contents Solvent Ionic Strength pH Pressure Temperature (K) Spectrometer 1 2D NOESY 2.4 mM oligonucleotide concentration, 25mM phosphate buffer; either 100% D2O or 90% H2O, 10% D2O 0.01 7.0 1 atm 293 2 DQF-COSY 2.4 mM oligonucleotide concentration, 25mM phosphate buffer; either 100% D2O or 90% H2O, 10% D2O 0.01 7.0 1 atm 293 3 ROESY 2.4 mM oligonucleotide concentration, 25mM phosphate buffer; either 100% D2O or 90% H2O, 10% D2O 0.01 7.0 1 atm 293 4 TOCSY 2.4 mM oligonucleotide concentration, 25mM phosphate buffer; either 100% D2O or 90% H2O, 10% D2O 0.01 7.0 1 atm 293
NMR Spectrometer Information Spectrometer Manufacturer Model Field Strength 1 Bruker AMX 600
NMR Refinement Method Details Software relaxation matrix, restrained molecular dynamics see references XwinNMR
NMR Ensemble Information Conformer Selection Criteria all calculated structures submitted Conformers Calculated Total Number 10 Conformers Submitted Total Number 10
Computation: NMR Software # Classification Version Software Name Author 1 collection XwinNMR 1.3 Bruker 2 data analysis XEASY 1.0 Bartels et al. 3 structure solution DYANA 1.5 P. Guntert et al. 4 structure solution MARDIGRAS 4.0 T.L. James 5 refinement DYANA 1.5 P. Guntert et al. 6 refinement Amber 4.1 D. Pearlman