1D9N

SOLUTION STRUCTURE OF THE METHYL-CPG-BINDING DOMAIN OF THE METHYLATION-DEPENDENT TRANSCRIPTIONAL REPRESSOR MBD1/PCM1


SOLUTION NMR
NMR Experiment
ExperimentTypeSample ContentsSolventIonic StrengthpHPressureTemperature (K)Spectrometer
13D_15N-SEPARATED_NOESY1.3MM MBD U-15N,13C; 20MM PHOSPHATE BUFFER; 50MM KCL; 5MM DTT50mM KCL6.51 ATMOSPHERE303
23D_13C-SEPARATED_NOESY1.3MM MBD U-15N,13C; 20MM PHOSPHATE BUFFER; 50MM KCL; 5MM DTT50mM KCL6.51 ATMOSPHERE303
34D_13C/13C-SEPARATED_NOESY1.3MM MBD U-15N,13C; 20MM PHOSPHATE BUFFER; 50MM KCL; 5MM DTT50mM KCL6.51 ATMOSPHERE303
44D_13C/15N-SEPARATED_NOESY1.3MM MBD U-15N,13C; 20MM PHOSPHATE BUFFER; 50MM KCL; 5MM DTT50mM KCL6.51 ATMOSPHERE303
5HMQC-J1.3MM MBD U-15N,13C; 20MM PHOSPHATE BUFFER; 50MM KCL; 5MM DTT50mM KCL6.51 ATMOSPHERE303
NMR Spectrometer Information
SpectrometerManufacturerModelField Strength
1BrukerDRX500
2BrukerDMX500
3BrukerDRX800
NMR Refinement
MethodDetailsSoftware
STRUCTURE CALCULATIONS WERE PERFORMED FOLLOWING SIMULATED ANNEALING PROTOCOLS USING X-PLOR 3.8.THE STRUCTURES ARE BASED ON A TOTAL OF 1270 NOE CONSTRAINTS, 44 DIHEDRAL ANGLE CONSTRAINTS AND 15 HYDROGEN BONDS.NMRPipe
NMR Ensemble Information
Conformer Selection Criteriastructures with the lowest energy
Conformers Calculated Total Number125
Conformers Submitted Total Number25
Representative Model1 (lowest energy)
Additional NMR Experimental Information
DetailsTHE STRUCTURE WAS DETERMINED USING MULTI-DIMENSIONAL HETERONUCLEAR NMR SPECTROSCOPY.
Computation: NMR Software
#ClassificationVersionSoftware NameAuthor
1processingNMRPipe1.7DELAGLIO
2data analysisPIPP97NOVGARRETT
3refinementX-PLOR3.8BRUNGER