X-RAY DIFFRACTION

Crystallization

Crystalization Experiments
IDMethodpHTemperatureDetails
15.8PROTEIN WAS CRYSTALLISED FROM PEG 2000 MONOMETHLY ETHER 50 MM MES PH 5.8, 0.1M NACL
Crystal Properties
Matthews coefficientSolvent content
242

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 67.28α = 90
b = 67.28β = 90
c = 164.73γ = 90
Symmetry
Space GroupP 41

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-ray100IMAGE PLATERIGAKU RAXIS1997-03-23M
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1ROTATING ANODERIGAKU

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)R Merge I (Observed)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
12.23089.70.048273.53319513
Highest Resolution Shell
ID #Resolution (High)Resolution (Low)Percent Possible (All)Percent Possible (Observed)R Merge I (Observed)Mean I Over Sigma (Observed)RedundancyNumber Unique Reflections (All)
2.22.3263.10.1285.51.8

Refinement

Statistics
Diffraction IDStructure Solution MethodCross Validation methodStarting modelResolution (High)Resolution (Low)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-Factor (Observed)R-WorkR-FreeR-Free Selection DetailsMean Isotropic B
X-RAY DIFFRACTIONMRTHROUGHOUTPDB ENTRY 1FRO2.23033193167989.70.190.180.25RANDOM16
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
RMS Deviations
KeyRefinement Restraint Deviation
p_transverse_tor35.6
p_staggered_tor17.8
p_scangle_it3.772
p_planar_tor3.7
p_scbond_it3.036
p_mcangle_it1.525
p_mcbond_it1.035
p_multtor_nbd0.233
p_xyhbond_nbd0.179
p_singtor_nbd0.177
RMS Deviations
KeyRefinement Restraint Deviation
p_transverse_tor35.6
p_staggered_tor17.8
p_scangle_it3.772
p_planar_tor3.7
p_scbond_it3.036
p_mcangle_it1.525
p_mcbond_it1.035
p_multtor_nbd0.233
p_xyhbond_nbd0.179
p_singtor_nbd0.177
p_chiral_restr0.108
p_planar_d0.031
p_angle_d0.03
p_plane_restr0.021
p_bond_d0.01
p_angle_deg
p_hb_or_metal_coord
p_xhyhbond_nbd
p_orthonormal_tor
p_special_tor
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms5702
Nucleic Acid Atoms
Solvent Atoms507
Heterogen Atoms108

Software

Software
Software NamePurpose
AMoREphasing
REFMACrefinement
MOSFLMdata reduction
CCP4data scaling