1ASU

AVIAN SARCOMA VIRUS INTEGRASE CATALYTIC CORE DOMAIN CRYSTALLIZED FROM 2% PEG 400, 2M AMMONIUM SULFATE, HEPES PH 7.5


X-RAY DIFFRACTION

Crystallization

Crystalization Experiments
IDMethodpHTemperatureDetails
17.5pH 7.5
Crystal Properties
Matthews coefficientSolvent content
2.550.77

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 66.47α = 90
b = 66.47β = 90
c = 80.99γ = 90
Symmetry
Space GroupP 43 21 2

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-ray295IMAGE PLATEMAR scanner 300 mm plate1994-11-19M
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)R Merge I (Observed)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
11.72588.50.0922.9918249

Refinement

Statistics
Diffraction IDStructure Solution MethodResolution (High)Resolution (Low)Cut-off Sigma (F)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-Factor (Observed)R-WorkR-FreeMean Isotropic B
X-RAY DIFFRACTION1.7821596688.70.1520.18832.923
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
RMS Deviations
KeyRefinement Restraint Deviation
p_orthonormal_tor40.1
p_staggered_tor18.7
p_scangle_it6.058
p_scbond_it3.867
p_mcangle_it2.974
p_planar_tor2.1
p_mcbond_it1.802
p_xhyhbond_nbd0.282
p_multtor_nbd0.277
p_singtor_nbd0.198
RMS Deviations
KeyRefinement Restraint Deviation
p_orthonormal_tor40.1
p_staggered_tor18.7
p_scangle_it6.058
p_scbond_it3.867
p_mcangle_it2.974
p_planar_tor2.1
p_mcbond_it1.802
p_xhyhbond_nbd0.282
p_multtor_nbd0.277
p_singtor_nbd0.198
p_chiral_restr0.133
p_planar_d0.04
p_angle_d0.035
p_plane_restr0.011
p_bond_d0.009
p_angle_deg
p_hb_or_metal_coord
p_xyhbond_nbd
p_transverse_tor
p_special_tor
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms1258
Nucleic Acid Atoms
Solvent Atoms181
Heterogen Atoms15

Software

Software
Software NamePurpose
PROLSQrefinement
DENZOdata reduction
SCALEPACKdata scaling