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PENICILLIN ACYLASE WITH P-HYDROXYPHENYLACETIC ACID
Starting Model(s) Initial Refinement Model(s) Type Source Accession Code Details experimental model Other ISOMORPHOUS TO NATIVE
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 batch method 7.2 CRYSTALLIZED FROM 12% PEG 8000, 50MM MOPS PH 7.2. BATCH METHOD. SOAKED IN 5MM P-HYDROXYPHENYLACETIC ACID, batch method
Crystal Properties Matthews coefficient Solvent content 3.06 59.5
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 52.12 α = 100.2 b = 65.08 β = 111.44 c = 76.3 γ = 105.81
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 300 IMAGE PLATE RIGAKU RAXIS II 1994-08-23 M
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 ROTATING ANODE RIGAKU
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2.55 28.06 95.6 0.38 12.6 2 26089 19
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 2.55 2.7 88.1 0.0071 9.5 1.9
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Starting model Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION ISOMORPHOUS TO NATIVE FREE R ISOMORPHOUS TO NATIVE 2.55 28.06 26089 1820 95.6 0.1366 0.1281 0.2199 0.1961 BASED ON NATIVE 40.98
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3]
RMS Deviations Key Refinement Restraint Deviation p_transverse_tor 26.9 p_staggered_tor 20.6 p_scangle_it 9.739 p_scbond_it 7.464 p_planar_tor 5.2 p_mcangle_it 4.588 p_mcbond_it 3.236 p_multtor_nbd 0.319 p_singtor_nbd 0.183 p_xyhbond_nbd 0.161
RMS Deviations Key Refinement Restraint Deviation p_transverse_tor 26.9 p_staggered_tor 20.6 p_scangle_it 9.739 p_scbond_it 7.464 p_planar_tor 5.2 p_mcangle_it 4.588 p_mcbond_it 3.236 p_multtor_nbd 0.319 p_singtor_nbd 0.183 p_xyhbond_nbd 0.161 p_chiral_restr 0.144 p_planar_d 0.045 p_angle_d 0.041 p_plane_restr 0.0258 p_bond_d 0.015 p_angle_deg p_hb_or_metal_coord p_xhyhbond_nbd p_orthonormal_tor p_special_tor
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 5980 Nucleic Acid Atoms Solvent Atoms 606 Heterogen Atoms 12
Software Software Software Name Purpose REFMAC refinement MOSFLM data reduction CCP4 data scaling ROTAVATA data scaling