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Crystal Structure of FtsZ with Z1134990241
Starting Model(s) Initial Refinement Model(s) Type Source Accession Code Details experimental model PDB 2Q1X initial MR model
Crystallization Crystalization Experiments ID Method pH Temperature Details ftsz-794 VAPOR DIFFUSION, SITTING DROP 5 294 0.1 M ammonium sulfate, 15.6% (w/v) PEG 3350, 0.1 M Bis-Tris pH 5.0.
Crystal Properties Matthews coefficient Solvent content 2.52 51.22
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 87.716 α = 90 b = 87.716 β = 90 c = 176.134 γ = 120
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol ftsz-794 ftsz-794 x-ray 100 PIXEL DECTRIS EIGER X 9M KB 2025-04-10 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline ftsz-794 SYNCHROTRON NSLS-II BEAMLINE 17-ID-1 0.920051 NSLS-II 17-ID-1
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Rrim I (All) Rpim I (All) CC (Half) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot ftsz-794 2.397 43.858 100 0.314 0.326 0.089 0.993 7.7 13.5 30038
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Rrim I (All) Rpim I (All) CC (Half) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) ftsz-794 2.397 2.439 100 2.114 2.205 0.626 0.344 12.4
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (All) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 2.397 43.897 30029 1524 99.92 0.178 0.1748 0.1801 0.2377 0.2394 41.069
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 0.053 0.026 0.053 -0.171
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_3_deg 15.431 r_dihedral_angle_6_deg 13.995 r_lrange_it 10.107 r_lrange_other 10.019 r_scangle_it 7.996 r_scangle_other 7.994 r_dihedral_angle_1_deg 6.796 r_dihedral_angle_2_deg 5.707 r_mcangle_other 5.32 r_mcangle_it 5.319
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_3_deg 15.431 r_dihedral_angle_6_deg 13.995 r_lrange_it 10.107 r_lrange_other 10.019 r_scangle_it 7.996 r_scangle_other 7.994 r_dihedral_angle_1_deg 6.796 r_dihedral_angle_2_deg 5.707 r_mcangle_other 5.32 r_mcangle_it 5.319 r_scbond_it 4.992 r_scbond_other 4.991 r_mcbond_it 3.404 r_mcbond_other 3.401 r_angle_refined_deg 1.635 r_angle_other_deg 0.606 r_symmetry_nbd_other 0.491 r_symmetry_xyhbond_nbd_refined 0.3 r_nbd_refined 0.216 r_xyhbond_nbd_refined 0.212 r_symmetry_nbd_refined 0.193 r_nbtor_refined 0.17 r_nbd_other 0.161 r_symmetry_nbtor_other 0.12 r_symmetry_xyhbond_nbd_other 0.088 r_chiral_restr 0.075 r_bond_refined_d 0.007 r_gen_planes_refined 0.006 r_bond_other_d 0.004 r_gen_planes_other 0.002
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 4230 Nucleic Acid Atoms Solvent Atoms 308 Heterogen Atoms 20
Software Software Software Name Purpose REFMAC refinement autoPROC data reduction Aimless data scaling XDS data reduction DIMPLE phasing PHASER phasing Coot model building gemmi data extraction