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Crystal Structure of FtsZ with Z89307993
Starting Model(s) Initial Refinement Model(s) Type Source Accession Code Details experimental model PDB 2Q1X initial MR model
Crystallization Crystalization Experiments ID Method pH Temperature Details ftsz-741 VAPOR DIFFUSION, SITTING DROP 5 294 0.1 M ammonium sulfate, 15.6% (w/v) PEG 3350, 0.1 M Bis-Tris pH 5.0.
Crystal Properties Matthews coefficient Solvent content 2.63 53.3
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 88.837 α = 90 b = 88.837 β = 90 c = 179.388 γ = 120
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol ftsz-741 ftsz-741 x-ray 100 PIXEL DECTRIS EIGER X 9M KB 2025-04-10 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline ftsz-741 SYNCHROTRON NSLS-II BEAMLINE 17-ID-1 0.920051 NSLS-II 17-ID-1
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Rrim I (All) Rpim I (All) CC (Half) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot ftsz-741 2.049 43.116 100 0.249 0.259 0.071 0.996 8.8 13.3 50212
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Rrim I (All) Rpim I (All) CC (Half) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) ftsz-741 2.049 2.084 100 2.357 2.455 0.682 0.349 12.8
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (All) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 2.049 43.154 50200 2533 99.944 0.184 0.1823 0.1899 0.2169 0.224 34.018
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 0.003 0.001 0.003 -0.008
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_3_deg 14.406 r_dihedral_angle_6_deg 14.094 r_dihedral_angle_2_deg 9.551 r_lrange_it 8.484 r_lrange_other 8.448 r_scangle_it 7.082 r_scangle_other 7.081 r_dihedral_angle_1_deg 6.496 r_scbond_it 4.57 r_scbond_other 4.569
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_3_deg 14.406 r_dihedral_angle_6_deg 14.094 r_dihedral_angle_2_deg 9.551 r_lrange_it 8.484 r_lrange_other 8.448 r_scangle_it 7.082 r_scangle_other 7.081 r_dihedral_angle_1_deg 6.496 r_scbond_it 4.57 r_scbond_other 4.569 r_mcangle_it 4.261 r_mcangle_other 4.261 r_mcbond_it 2.875 r_mcbond_other 2.874 r_angle_refined_deg 1.674 r_angle_other_deg 0.576 r_symmetry_nbd_other 0.399 r_symmetry_xyhbond_nbd_refined 0.266 r_nbd_refined 0.217 r_nbd_other 0.196 r_xyhbond_nbd_refined 0.195 r_symmetry_nbd_refined 0.173 r_nbtor_refined 0.169 r_symmetry_nbtor_other 0.112 r_chiral_restr 0.077 r_bond_refined_d 0.007 r_gen_planes_refined 0.006 r_bond_other_d 0.004 r_gen_planes_other 0.001
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 4218 Nucleic Acid Atoms Solvent Atoms 308 Heterogen Atoms 22
Software Software Software Name Purpose REFMAC refinement autoPROC data reduction Aimless data scaling XDS data reduction DIMPLE phasing PHASER phasing Coot model building gemmi data extraction